Gene Information

Name : Thexy_1317 (Thexy_1317)
Accession : YP_004471022.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1379242 - 1379991 bp
Length : 750 bp
Strand : -
Note : KEGG: ttm:Tthe_1440 flagellar biosynthetic protein FliP; TIGRFAM: flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
ATGATAAAGATAAAAAAATTTAGCTGGCTGGTGCTTGTATTGCCAATTTTATTGACACAAAATGCATATGCAGCTCCAAA
TAATGCTTCATCTTTAATAACGGTCAATGCTCCATCGACTTCTAATGAAGTCGCATCAAGCATCCAAATAGTTCTTCTTT
TAACTGTATTGACATTAGCGCCATCAATACTTATAATGATGACTTCTTTTACGAGGATAATTGTTGTTTTGTCGTTTTTA
AGAAATGCCTTAGGTCTACAGCAAATGCCTCCAAATCAAGTTTTGATTGGTCTGGCTTTGTTTTTGACGTTTTTTATAAT
GGCACCAGTTGGTTCACAAATAAATAAAGATTCTATTCAGCCATATATGCAAGGAAAAATAACGCCACAAGAAGCTTATG
TTAAGGCAAGAGATCCACTAAAGAACTTTATGCTTAAGCAGACCAGGAAAAATGACTTAAATTTGTTTATCAATTTGTCA
AAGTTAAAAGTAAAAAGTGTAAATGATGTTCCTTTGCGAGTAGTCATACCGTCATTCATAATAAGTGAACTAAAAACGGC
GTTTGAAATTGGATTTATCATATACATACCGTTCTTAATCATAGACATGGTTGTTGCCAGTGTATTGATGTCAATGGGGA
TGTTCATGTTGCCACCTGTACTTATATCCTTGCCATTTAAACTTTTGCTTTTCATACTGGTGGATGGATGGAATATTTTG
GCTAAGTCTTTAGTAATTGGTTTTAGATAA

Protein sequence : 
MIKIKKFSWLVLVLPILLTQNAYAAPNNASSLITVNAPSTSNEVASSIQIVLLLTVLTLAPSILIMMTSFTRIIVVLSFL
RNALGLQQMPPNQVLIGLALFLTFFIMAPVGSQINKDSIQPYMQGKITPQEAYVKARDPLKNFMLKQTRKNDLNLFINLS
KLKVKSVNDVPLRVVIPSFIISELKTAFEIGFIIYIPFLIIDMVVASVLMSMGMFMLPPVLISLPFKLLLFILVDGWNIL
AKSLVIGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 1e-21 43
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 1e-21 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 3e-22 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 4e-22 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 4e-22 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-28 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-28 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-28 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-28 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-28 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-28 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-27 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-14 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thexy_1317 YP_004471022.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-45 58
Thexy_1317 YP_004471022.1 flagellar biosynthetic protein FliP VFG2016 Protein 5e-46 58
Thexy_1317 YP_004471022.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-48 54
Thexy_1317 YP_004471022.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-44 51
Thexy_1317 YP_004471022.1 flagellar biosynthetic protein FliP VFG0519 Protein 2e-22 43