Gene Information

Name : Thexy_1316 (Thexy_1316)
Accession : YP_004471021.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1378957 - 1379226 bp
Length : 270 bp
Strand : -
Note : KEGG: ttm:Tthe_1439 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGGATCCGGGATTAGTTCTTGATATAGGCAGAGAAGCATTAATGGTGACCATGATGGTTTCTGCGCCACTTCTAATTAT
ATCATTGCTTGTAGGATTAATAATAAGTATTTTTCAGGCCACAACACAAATTCAAGAGCAGACGTTGACATTTGTGCCGA
AAATTTTAGCAATATTTGCATCTATTATATTGTTTGGTCCATGGATGCTTACGGTACTTATTAATTATACTCAAAAATTA
ATATTAAATATTAACAGTTTTATCAGGTAG

Protein sequence : 
MDPGLVLDIGREALMVTMMVSAPLLIISLLVGLIISIFQATTQIQEQTLTFVPKILAIFASIILFGPWMLTVLINYTQKL
ILNINSFIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-04 41
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-04 41
escS AAL57528.1 EscS Virulence LEE Protein 6e-04 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 6e-04 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 0.001 41
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 0.001 41
escS AAK26701.1 EscS Virulence LEE Protein 6e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thexy_1316 YP_004471021.1 flagellar biosynthetic protein FliQ VFG1260 Protein 5e-11 50
Thexy_1316 YP_004471021.1 flagellar biosynthetic protein FliQ VFG2339 Protein 5e-10 45