Gene Information

Name : ambt_02650 (ambt_02650)
Accession : YP_004465886.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 617384 - 618100 bp
Length : 717 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGGAAATGAAACTGTAGTAAGCATGCAAAACATACATAAGAAATATACCGGCTCTGAAATAGAGACCCTTGCGTTACA
AGGTATTTCACTTGATATACACAGTGGTGAGTTTGTTGCTATTACCGGTCCTTCTGGCTGTGGGAAATCGACATTACTTA
CCATTATGGGCCTGCTAGACAGTGCAAGTGAAGGGGAATATGAAATTAGTGGTATTGATACAAAGGGCCTGTCGGTAGAT
CAGAGAACCCAAGTGCGAAATCAGCACATAGGCTACGTGTTTCAGTCTTTTAATCTTATCGATAGCATGAGCATTTTTGA
AAACGTAGCTCTTCCCTTAGCGCATAGGGGCGAGAAAACAGAAGCAATAAAAGCTGCCGTATTTGAGGCGTTAGATAAAG
TAGGTATGCAGCATAAAATTAACTTTAAGCCTAATCAGCTTTCAGGTGGTCAGCAACAGCGTGTGGCCATCGCCCGAGCT
CTAGTCGGTAAGCCAGATTTAATACTCGTTGATGAGCCAACTGGAAATCTTGATACTAAAAACGGTGACGCGGTCATGAA
GCTATTAATGGAGCTAAATCAGCAAGGTGCCACCATAGTGATGGTAACGCATGACAGCCGTTATAGCGGCTTAGCAAACC
GTCAGATTCAACTGTTAGATGGTAAAGTTGTGGGTGAGAAACAAATGCGCATTGAGCGTGAGCAGGTGGTGGTATGA

Protein sequence : 
MGNETVVSMQNIHKKYTGSEIETLALQGISLDIHSGEFVAITGPSGCGKSTLLTIMGLLDSASEGEYEISGIDTKGLSVD
QRTQVRNQHIGYVFQSFNLIDSMSIFENVALPLAHRGEKTEAIKAAVFEALDKVGMQHKINFKPNQLSGGQQQRVAIARA
LVGKPDLILVDEPTGNLDTKNGDAVMKLLMELNQQGATIVMVTHDSRYSGLANRQIQLLDGKVVGEKQMRIEREQVVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-36 45
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_02650 YP_004465886.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-48 46
ambt_02650 YP_004465886.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-37 44
ambt_02650 YP_004465886.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-38 44
ambt_02650 YP_004465886.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_02650 YP_004465886.1 ABC transporter ATP-binding protein VFG0869 Protein 1e-25 42