Gene Information

Name : rph (ambt_21940)
Accession : YP_004469679.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 4909384 - 4910097 bp
Length : 714 bp
Strand : -
Note : COG0689 RNase PH

DNA sequence :
ATGCGTCCAAGCGGCAGAACCGCCAATCAAATTCGTCCAGTTACTATTACTCGTCAGTACACATGTCACGCTGAAGGCTC
AGTGCTGGTGGAGTTCGGCAACACTAAAGTGTTGTGTAACGCCACGGTTGAAGAAGGCGTGCCTCGTTTCATGAAAGGCC
AGGGCAAAGGTTGGATCACGGCGGAATACAGCATGCTTCCTCGTGCTACTCATACTCGTAGTGGTCGTGAAGCTGCTCGT
GGTAAACAAGGTGGCCGTACGCTAGAAATTCAACGCCTTATCGCGCGCTCGCTTCGCGCTGCAGTAGATTTGAAACTACT
AGGCGAAAACACGATCACGCTTGATTGTGATGTTATTCAAGCTGACGGCGGTACACGTACTGCGTCTATCACGGGTGCCT
GTGTGGCTTTAGTTGATGCGTTAACATATATGCGTAGCAAAGGCATTTTGAAAGCCAACCCTCTTAAGCACATGATTGCG
GCGTTGTCGGTAGGTATTTATAAAGGTACGCCTATTGCTGACCTTGAGTACACCGAAGATTCAGTAGCCGAAACAGACAT
GAATATCGTCATGACAGAAACCGGTAAGCTTATTGAAGTACAAGGTACCGCAGAAGGCGAACCGTTTGCGTTTGAAGAGC
TTGATGAAATGCTAACTATTGCTAAGCATGGTTTGCGTGAATTGTTCGATATTCAAAAAGCAGCACTGGCGTAA

Protein sequence :
MRPSGRTANQIRPVTITRQYTCHAEGSVLVEFGNTKVLCNATVEEGVPRFMKGQGKGWITAEYSMLPRATHTRSGREAAR
GKQGGRTLEIQRLIARSLRAAVDLKLLGENTITLDCDVIQADGGTRTASITGACVALVDALTYMRSKGILKANPLKHMIA
ALSVGIYKGTPIADLEYTEDSVAETDMNIVMTETGKLIEVQGTAEGEPFAFEELDEMLTIAKHGLRELFDIQKAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-65 57