Gene Information

Name : ambt_21575 (ambt_21575)
Accession : YP_004469606.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 4826991 - 4828454 bp
Length : 1464 bp
Strand : -
Note : COG4584 Transposase and inactivated derivatives

DNA sequence :
ATGCCAACGGCACCTATTTCAATGCGTAAACTTAAAGAGATTTTAAGACTAAAATACGACTGTAAACTCAGTCATCGAAA
GATAGCAAACAGCTTATCTATTTCACCTTCAATTGTTTCTAAATATGCCTGTAAATCAGCAGAGTTAGGTATCACTTGCT
GGCCACTTGATGAAAAATGGGATGATCATTCTCTGCAACGAGCATTCTTCAAAACAAAGCCCCGACTAAAAGGCTTTAGT
ATTCCTGACTGGTTGTTAGTTCAGCAGGAGCTGCGACCCAAAACCATGACGCTATTGCTGCTTTGGCAAGAATACAAAGA
GCGACACGAGGAAGGATTTTACAGTTACACCCACTTCTGCCGACAGTACAAGGCATGGCTTAAATGTCAAAAACCGTCCA
TGCGACAAAACCATAAAGCAGGTGAAAAACTGTTTGTTGATTACTGCGGCCCAACTATGAATATTGTTGATGCTAGTACA
GGTGAATACCGTACAGCTCAAGTGTTTGTCGCAGTTATGGGCGCATCTAATTATACGTATGCGGAGGCAACGTATAGCCA
AAAGCTAGAAGATTGGGTGATGAGTCATGCTCGTTGTTTTGAGTTTCTTGGTGGTGTGCCAGAGCTGGTAATCCCTGACA
ACTTAAAAAGTGCGGTAACTAAACCTTGTCGATATGAGCCTGATTTAAATCCAACCTACCAACAATTGGCGACACACTAC
AATACGGTCATTGTGCCTGCTAGACCTTATAAGCCCAAGGATAAAGCCAAAGCAGAAGTGGGTGTGCAAATTGTCGAACG
CTGGATAATGGCACGGCTTCGCAATGAAAGCTTCTTTAGCTTGCGCCAATTAAACCTAAAGATACAAAAACTGCTTGTCG
ACTTAAACCAGCGGAAAATGAAGAAGCACCCTGGTTCAAGGCTCAGTCAGTTTGAATCCATTGATAAACCTGCTCTCAAA
CCACTACCCACACAGGCTTACAGTTACACCTTAGTCAAACAAGTAAGCGTGCATATTGATTATCATGTCGAAGTTGAAAA
ACACTACTACTCAGTACCTCATACCTTGATCAAACAAAAGCTTGAAGCCCATGCCACAGGTCAACTGGTGACACTTTACC
ATCAGGGTGTTCAAGTAGCCGTTCATCCAAGATCACACCGAGAAGGTGCACACACTACGCTTGATCTACATATGCCAATA
GCTCATCAAAAGCAGCAGCAATGGACACCACAACGGTTCGAGCGTTGGGCAGCTAAGTTCGGTGGTTCAACGGAGCAGTT
TGTTATGCAATTGATGCAAGCTAAAAAGCATCCAGAACAAAGCTACCGTGCTTGTATGGGGTTATTAAGCCTAGGTAAGA
AGTTTACTGACCAACGTCTTGAAGCAGCCTGTCATCGCGCATTAGCCACAGGTGTTACTCGCGTAAAACAAGTAAAAAAC
AATTTTAGAAAAGGGCTTGGATAA

Protein sequence :
MPTAPISMRKLKEILRLKYDCKLSHRKIANSLSISPSIVSKYACKSAELGITCWPLDEKWDDHSLQRAFFKTKPRLKGFS
IPDWLLVQQELRPKTMTLLLLWQEYKERHEEGFYSYTHFCRQYKAWLKCQKPSMRQNHKAGEKLFVDYCGPTMNIVDAST
GEYRTAQVFVAVMGASNYTYAEATYSQKLEDWVMSHARCFEFLGGVPELVIPDNLKSAVTKPCRYEPDLNPTYQQLATHY
NTVIVPARPYKPKDKAKAEVGVQIVERWIMARLRNESFFSLRQLNLKIQKLLVDLNQRKMKKHPGSRLSQFESIDKPALK
PLPTQAYSYTLVKQVSVHIDYHVEVEKHYYSVPHTLIKQKLEAHATGQLVTLYHQGVQVAVHPRSHREGAHTTLDLHMPI
AHQKQQQWTPQRFERWAAKFGGSTEQFVMQLMQAKKHPEQSYRACMGLLSLGKKFTDQRLEAACHRALATGVTRVKQVKN
NFRKGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 4e-149 61
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 7e-149 61
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-149 61
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 2e-117 52