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Name : ambt_21390 (ambt_21390) Accession : YP_004469571.1 Strain : Alteromonas sp. SN2 Genome accession: NC_015554 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4794556 - 4795782 bp Length : 1227 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGGCCGCCTTCGCTTATAAAGCGGTAAATAACCGTGGCCGTAACGCAAATGGTGTACTGGAAGGCGATAATGCTCGCCA AGTGCGCCAGCAATTGCGTGAAAAAGGGCTCATTCCTTTAGAAGTAGAACAAGTTACCGAGCGCGGAAAAAGTGACGGTA AAAGTGGTGGTTTCTCGTTTTTTAAACCGAGAATTTCAGCCTCAGATCTGGCCCTGTTAACCCGTCAAATGGCCACCTTG GTAGAATCTGCCTTACCGGTAGAAGAAGCCTTACTGGCGGTTGCCGAGCAGTGTGAAAAGCCCCGTCAAAAGAACATGAT GATGGCTGTTCGAAGCAAAGTGGTTGAAGGTCATGGTTTAGCCGATGCCTTGTCTGAATTTCCTAGTGTATTTGACGACT TATACCGCGCCATGGTGGCGGCAGGTGAAAAATCCGGTCACTTAGATACGGTACTTAATCGCCTTGCCGACTACACCGAA CGACGCCAGCAAACTCGCAGTCAAATTACCCAAGCACTTATTTACCCATCGCTCATGCTGTTTTTCGCTTTCGGCATTGT GATGTTATTGCTGACGGTGGTTGTGCCTAAAATAGTGGGTCAATTCGACCATATGGGGCAAGACCTTCCAGGTATTACCC AAGTACTTATTTCGGTGAGTACTTGGCTACAAAATTACGGCCTTATCTTGCTGGTAGTAGTGGCTATTCTGGCGGTAATT ATTCAGCGTGTGCTTCAGCAGAAAAAGATGAAGCTAAGGTTTCACAAAGTTATTTTGAAACTTCCGCTTATTGGCAAAGT GTCCCGCGGGCTTAATACCGCTCGCTTTGCACGTACCTTAAGTATATTAAGTGCCAGCGCCGTGCCTTTACTTGAATCTA TGCGCATTTCTGGCGATGTACTTGAAAACCAGCATATAAAGAATCAGGTAGCCGATGCTGCCATTAATGTAAAAGAAGGG AGCAGCTTGCGCGCTGCGCTCGACAATACAAAAATTTTCCCGCCAATGATGATGCACATGATTGCATCGGGTGAAAAGTC TGGCGAATTACAGCAAATGCTTGGTCGCGCCGCCGATAACCAAGATAGGGAATTTGAAGCCCTTGTTGGTGTCTCACTAA AAGTATTTGAACCTCTACTTATCGTGTCGATGGCTGGCATAGTGCTGTTTATCGTAATGGCAATTTTGCAGCCTATTTTG GCCTTAAACAATATGGTGAATATCTGA Protein sequence : MAAFAYKAVNNRGRNANGVLEGDNARQVRQQLREKGLIPLEVEQVTERGKSDGKSGGFSFFKPRISASDLALLTRQMATL VESALPVEEALLAVAEQCEKPRQKNMMMAVRSKVVEGHGLADALSEFPSVFDDLYRAMVAAGEKSGHLDTVLNRLADYTE RRQQTRSQITQALIYPSLMLFFAFGIVMLLLTVVVPKIVGQFDHMGQDLPGITQVLISVSTWLQNYGLILLVVVAILAVI IQRVLQQKKMKLRFHKVILKLPLIGKVSRGLNTARFARTLSILSASAVPLLESMRISGDVLENQHIKNQVADAAINVKEG SSLRAALDNTKIFPPMMMHMIASGEKSGELQQMLGRAADNQDREFEALVGVSLKVFEPLLIVSMAGIVLFIVMAILQPIL ALNNMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 9e-87 | 53 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-86 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ambt_21390 | YP_004469571.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-84 | 53 |
| ambt_21390 | YP_004469571.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-84 | 49 |
| ambt_21390 | YP_004469571.1 | general secretion pathway protein F | VFG1870 | Protein | 6e-75 | 44 |
