Gene Information

Name : ambt_18445 (ambt_18445)
Accession : YP_004468984.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 4128850 - 4130787 bp
Length : 1938 bp
Strand : +
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGACTCGACGCGAACAGCGCCAACAGGCGCAAGACTTTATTAATCAATTGGCCGGTGAGGCCTACCCTAATTCTAC
TCGTCACTACGAAAAAGGCAGCCGCGACGATATTAACGTTGCCATGCGACTGATTCACCAGCACGACAGCTTAATTGGCG
GCACCGAAGAAAAGCCTATATTTGAAAGTAACCCACCCATTGGGGTTTACGATACTTCCGGCCCTTACGGCGACCCAGAC
GTTACCATTAACGTGCAAAAAGGGTTGGCGCCGCTACGAGAAAACTGGATTAAAGCCCGCGAAAACACGTACCAGCTTGA
AGGGGTATCGTCGCACTTCGCGAAGCAACGTGAGCAAGATATTGTCACTGAAGATTTTCGTTTCACGCGCACGCTGAAAC
CACGCAAAGCCCTAGAAGGTAAAAATGTAACCCAACTGCATTACGCTCGCCAAGGTATTATAACGCCCGAAATGGAATAC
ATTGCCATTCGCGAAAACATGGGCCGCGACGCACTAAAAGACAGCCCGCTAAGCAATCAACACAAAGGCGAGCACTTCGG
GGCTAACCTGCCTTCAAACATTACCCCTGAATTTGTTCGCCAAGAAGTGGCAGCTGGTCGCGCGATTATTCCCGCGAACA
TAAATCACCCTGAACTAGAACCTATGATCATTGGCCGCAATTTTTTAGTCAAAATTAACGCCAATATTGGTAATTCAGCG
GTCACCTCGTCTATTGAAGAGGAAGTAGAAAAGCTAGTGTGGTCTACCCGCTGGGGCGCCGATACGCTTATGGATTTATC
CACCGGCCGCAACATTCACGAAACACGCGAATGGCTGCTTCGTAACAGCCCAATCCCTTTAGGTACTGTGCCCATCTACC
AAGCCCTCGAGAAAGTAAATGGCGTGGCTGAAGATCTTACCTGGGAGTTGTTTAAAGACACCCTTATCGAGCAAGCCGAA
CAAGGGGTAGATTACTTCACCATTCACGCAGGCGTATTACTTGAATACGTGCCACTTACCGCAAATCGAGTAACGGGCAT
TGTGTCGCGCGGCGGCTCTATTATGGCCAAGTGGTGTTTAAGTCATCACAAACAGAGCTTTTTGTACGAACGATTCCGCG
ATATTTGTGAAATTTGTGCCGCTTATGATGTATCGCTTTCTTTAGGTGACGGATTACGCCCAGGCAGCGTAGCCGATGCA
AACGATGAGGCACAATTTTCTGAACTTCGCACCTTGGGTGAGCTCACTAAAATAGCCTGGGAATACGATGTTCAGGTTAT
GATTGAAGGCCCAGGGCATGTGCCAATGCACATGATCAAAGCTAATATGGAAGAGCAGTTAACCCATTGCCATGAAGCGC
CTTTTTACACATTAGGCCCCCTAACTACTGATATCGCGCCAGGTTATGACCACTTCACGTCTGGAATTGGTGCCGCTATG
ATAGGTTGGTACGGCTGCGCCATGCTTTGTTATGTTACCCCTAAAGAGCATTTGGGTTTGCCCAACAAAGAAGATGTTAA
GCAGGGGCTAATTACCTACAAAATTGCGGCACATGCTGCCGACTTAGCGAAAGGCCACCCCGGTGCGCAAATTCGCGATA
ACGCCATGTCGAAAGCCCGTTTTGAGTTTCGTTGGGAAGACCAGTTCAACCTCGCATTAGACCCCCATACCGCCCGCGCT
TATCACGATGAAACCCTGCCCAAGGCCTCGGGTAAAGTGGCACATTTTTGTTCTATGTGCGGCCCCAAGTTTTGCTCTAT
GAAAATTTCTCAAGAAGTGCGAGATGTAGCCAAAGCTAATCAGGAAGCTGCGCAACAAGACAGTGCTCTTCAAGAAAAAG
CACTGCAAGAAAAAGGCATGCAAGACATGGCTACCGCCTTTAATAACTCTGGAGCTGCGCTATATCACGGTGCCGATACC
AAGGTGCAGCTGCCGTGA

Protein sequence :
MSTRREQRQQAQDFINQLAGEAYPNSTRHYEKGSRDDINVAMRLIHQHDSLIGGTEEKPIFESNPPIGVYDTSGPYGDPD
VTINVQKGLAPLRENWIKARENTYQLEGVSSHFAKQREQDIVTEDFRFTRTLKPRKALEGKNVTQLHYARQGIITPEMEY
IAIRENMGRDALKDSPLSNQHKGEHFGANLPSNITPEFVRQEVAAGRAIIPANINHPELEPMIIGRNFLVKINANIGNSA
VTSSIEEEVEKLVWSTRWGADTLMDLSTGRNIHETREWLLRNSPIPLGTVPIYQALEKVNGVAEDLTWELFKDTLIEQAE
QGVDYFTIHAGVLLEYVPLTANRVTGIVSRGGSIMAKWCLSHHKQSFLYERFRDICEICAAYDVSLSLGDGLRPGSVADA
NDEAQFSELRTLGELTKIAWEYDVQVMIEGPGHVPMHMIKANMEEQLTHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPHTARA
YHDETLPKASGKVAHFCSMCGPKFCSMKISQEVRDVAKANQEAAQQDSALQEKALQEKGMQDMATAFNNSGAALYHGADT
KVQLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68