Gene Information

Name : hemC (ambt_18335)
Accession : YP_004468962.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 4102789 - 4103724 bp
Length : 936 bp
Strand : +
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGCCAGTTGAAAAAAACCGAACTATTCGCATCGCTACACGCAAAAGCGCGCTGGCGCTGTGGCAAGCAGAATACGTGAA
AGCGAAACTGTTAGAGCATCACGATGGGATAGCGGTTGAGTTGGTGCCTATGAGCACTCAGGGCGATAGAATACTTGATA
CGCCGCTGGCGAAAATTGGTGGTAAAGGCTTGTTTATAAAAGAGCTTGAAGTCGCCATGTTAGAAGGCAGAGCCGATATT
GCCGTGCATTCAATGAAAGATCTACCGGTTGAATTCCCAGAAGGCTTTGGCCTTCACGCTATTTGTGAACGCGAAAACCC
ATTTGATGCCTTTGTTTCAAATCACTTCGATAATTTAGACGCGTTACCAGAAGGTGCTGTGGTGGGTACCTCGAGCCTTC
GCCGCCAATGCCAAATTCGTAAGCATCGTCCAGATCTGAAAATTAAAGACTTACGCGGCAACGTGAATACCCGCCTCGCC
AAACTAGATGCGGGTGAATACGATGCCATCATTCTTGCCTCTGCGGGCCTCATACGTTTGGGCATGGAAGAGCGCATTAA
AACGGGCTTGCCGGCTTCGGTATCACTTCCTGCCGTTGGGCAAGGTGCGGTAGGTATTGAGTGTCGTAATGACGATGCCG
AGCTTATTGCGTTACTTCAAGCGCTGAACCATGGTGAAACTCAAACCCGAGTGAGCGCAGAGCGTGCTATGAATGAACGC
TTAGAAGGCGGTTGCCAAGTACCTATTGGTAGTTTTGCTACCCTTGACGGAGACAGCATAACCTTAACCGGCATGGTCGG
ACAGCCAGATGGCTCAACCTTATTGTTCGCTTCTGCAACAGGCCCTACAAAAAATGCGAAGAGTATTGGCGTAGAAGTCG
CCGAGGCATTGCTTGAACAAGGTGCAGGGGAAATTCTTAGCGCATTGTATGACTAA

Protein sequence :
MPVEKNRTIRIATRKSALALWQAEYVKAKLLEHHDGIAVELVPMSTQGDRILDTPLAKIGGKGLFIKELEVAMLEGRADI
AVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDALPEGAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLA
KLDAGEYDAIILASAGLIRLGMEERIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNER
LEGGCQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEALLEQGAGEILSALYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-90 64
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-90 64