Gene Information

Name : ambt_18295 (ambt_18295)
Accession : YP_004468954.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4093981 - 4096053 bp
Length : 2073 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
ATGCAAACTCTTGCCACCACGCCCATCACCGCCCTAAAAGGGGTAGGCGCTAAAGTGGCCGAAAAGCTGGCTAAAATTGG
CTTATTTACCTTACAAGACGTGCTGTTTCACTTGCCGCTGCGTTATGAAGACAGAACACGGGTTTACAGTGTGGCAGAGT
GCCGTCCGTTTACTCATGTTAGTGTGCAGGGCGAAGTGAAAAGCGCCGACATCCAATACGGCAAAAAACGCATGTTAGTG
GTGAAGCTAAGCGATGGTACAGGCACTATTACTTTACGCTTTTTTCACTTTGGCGCAGTGCAGCGCACGATGATGACACC
GGGCAATCTAATACGATGTTTTGGTGAGGTTCGCACTGGCAAGTGGGGCATTGAAATGATGCATCCCGAATTCAAATTAA
TTGATGAAGATGCACCGCTAGAAGCAGAATCCTTAACACCTGTTTACCCCACTACCGAAGGGGTAAAGCAACTCACCCTG
CGAAACTTAACCGACCAAGCGCTTAAAATGTTAGATAAAGGCGCACTGGCCGACTTACTGCCTGAAGGTATGTACAGCGA
CCAGATAAGCCTAAACGAAGCATTGCATGCGGTACATCGGCCAGCCCCCGATACCGATGTGCATGAAATGGAAGAAGGGC
TTCATCCTGCTCAGTATCGATTAATTTTAGAAGAGCTTTTGTCACACCATTTAAGTGTATTAAAAGTACGTAAGCTTTCA
GATGCGCAGCCAGGCATTAGCATTAAGGTCGACAAGCCTCTTATTGAAAAAATGTTGGCCCAATTACCGTTTTCTCCCAC
AGGGGCACAGCAGCGGGTAGTAGCCGATATTCAGCAAGATATGCAACACCCCAGGCCCATGATGCGCTTAGTACAGGGTG
ATGTAGGCTCAGGGAAAACCTTAGTGGCCGCCCTTGCAGCGCTATCTGCTATTGGGGCTGGGCATCAGGTTGCGCTTATG
GCACCCACCGAATTACTTGCCGAACAACATGCGAATAATTTTAGAGAATGGTTCGCACCGTTGGGGATAGAAATAGGGTG
GCTAGCCGGTAAGCTTAAAGGAAAAGCCCGCACCGAAGTGTTAGCGCGGCTTGAAAGTGGCGATGTACAAATGTTGGTGG
GCACCCACGCGATTTTTCAAGAAAGCGTAAACTACCAACAACTCGCGTTAGTGATTGTGGATGAGCAGCACAGATTTGGT
GTACATCAACGCCTTGCGCTTCGAGATAAAGGCGAACAGCAGGGGCGATACCCGCACCAGTTAATTATGACGGCCACCCC
TATACCTCGAACGCTGGCCATGACTGCCTATGCCGACCTAGATACCTCAGTAATCGATGAATTACCTCCGGGAAGAACCC
CTGTGACCACAGTGGTATTGCCGGATAGCAGGCGAGGGGATGTTATTGAGCGTGTTCGCACAGCCTGCAAAGAAAACGGT
AGGCAAGCCTATTGGGTTTGTACCCTTATTGATGAATCGGAAGTGTTGGAATGCCAAGCCGCTGAAGATGCTGCGGTTAT
CCTTCGCACAGCACTACCTGAACTTAACGTAGGTTTAGTGCACGGGCGCCTAAAGCCAGCTGAAAAACTACAAGTAATGG
CTGATTTTAAAGCCGGTGAGCTCGATTTACTGGTGGCTACAACCGTTATTGAGGTTGGGGTAGATGTACCCAATGCCAGT
ATTATGATTATTGAAAACCCCGAACGATTAGGTTTAGCTCAGCTACACCAACTTCGCGGGCGAGTAGGGCGTGGGGCGGT
AGAAAGCCAATGCGTACTTATGTACCAAAGCCCTTTGTCTAAAACGGCTACTCAGCGATTAACTGTGCTGCGAGAATCTA
ACGATGGGTTTTATATTGCCCAACGAGACTTAGAAATTCGTGGGCCAGGAGAATTTATGGGTACTCGTCAAACCGGTATG
GCGGAACTTAAAATTGCCGACTTAGTGCGAGACGCCGCGCTTATTCCCAAAGTACAAGAAATTGCCTATACCTTATGGGA
GCAATATCCTTCCCATGCACAAGCCATTATCAACCGCTGGATAGGGCACAAGGAGCAATATGGCCATGCTTAA

Protein sequence :
MQTLATTPITALKGVGAKVAEKLAKIGLFTLQDVLFHLPLRYEDRTRVYSVAECRPFTHVSVQGEVKSADIQYGKKRMLV
VKLSDGTGTITLRFFHFGAVQRTMMTPGNLIRCFGEVRTGKWGIEMMHPEFKLIDEDAPLEAESLTPVYPTTEGVKQLTL
RNLTDQALKMLDKGALADLLPEGMYSDQISLNEALHAVHRPAPDTDVHEMEEGLHPAQYRLILEELLSHHLSVLKVRKLS
DAQPGISIKVDKPLIEKMLAQLPFSPTGAQQRVVADIQQDMQHPRPMMRLVQGDVGSGKTLVAALAALSAIGAGHQVALM
APTELLAEQHANNFREWFAPLGIEIGWLAGKLKGKARTEVLARLESGDVQMLVGTHAIFQESVNYQQLALVIVDEQHRFG
VHQRLALRDKGEQQGRYPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVVLPDSRRGDVIERVRTACKENG
RQAYWVCTLIDESEVLECQAAEDAAVILRTALPELNVGLVHGRLKPAEKLQVMADFKAGELDLLVATTVIEVGVDVPNAS
IMIIENPERLGLAQLHQLRGRVGRGAVESQCVLMYQSPLSKTATQRLTVLRESNDGFYIAQRDLEIRGPGEFMGTRQTGM
AELKIADLVRDAALIPKVQEIAYTLWEQYPSHAQAIINRWIGHKEQYGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-93 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_18295 YP_004468954.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60