|
Name : ambt_17200 (ambt_17200) Accession : YP_004468747.1 Strain : Alteromonas sp. SN2 Genome accession: NC_015554 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3883101 - 3884837 bp Length : 1737 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGAATAAACCTAGAGTTCGCCTTGGCGACCTTCTTGTTCAGCATAATTTGATTAGTGCTGATGAGCTAATGACGGCATT GTCTGAGCAAAAGAGTACGGGCCGCAAGTTAGGTGCTACGCTAATTTCGATGGGGTTGGTGACTGAACACCAAATGCTTG AATTGTTATCTCGGCATTTAAATGTTCCGCTTATCGATATCGATCAATACCGCGTAAATCAACAAGCTGTGCTGCTTTTA CCTGAAATTCAAGCTAGGCGATATCGCGCACTCGTTATTGATGATAAGGGTGACAGCCTGCTAGTTGCCATGTCAGATCC CGCCGATTTAACCGCGGTAGATCATCTTTCAGAAACGTTAAACAGACAAATTGAACTTGCCGTAGTTAGCGAGCAACAGC TGTTCACCGCTTACGATACTTTTTATCGAAAAACCCAAGAAATTGCGAGTTTTGCCCAAGAACTAGCAGAAGAATACGAT ACTGAAGATAACTTTAATATAGAACTTGGTGGTGCGGGCGATCAAGACACAACAGTCGCCCGTTTGCTACAATCTATTTT TGAAGATGCCGTGATAGCAAAAGCGTCTGATATTCATATAGAACCTGATGAAAATCAGTTGAGAATACGACAGCGGGTAG ATGGGGTTTTACAAGAAACTGTGATACCCGAGAAAAGTATAGCGGCCGCGTTAGTGTTGCGTTTAAAGCTAATGGCGGGG TTAGATATTTCCGAAAAGCGGCTACCGCAAGATGGCCGTACTCAAATTAAAGTTAAAGGGCACAAAATAGACGTGCGTTT GTCCACCATGCCAGTGCAAGGTGGTGAGTCTGTGGTCATGCGTTTGCTTGATCAGTCCGCAGGAATACTGACCCTTGAAC AAACCGGCATGCCTTCAGCACAGTTAACCCGCTTTAGAAATTTGTTACGACGCCCTCATGGGATGATTTTGGTTACCGGG CCTACAGGTTCGGGTAAAACGACCACTTTGTATGGTGCATTAAGCGAATTAAATACGGCAAAGTCGAAAATTATTACCGT AGAAGATCCGGTGGAATACCGCTTACCGCGCATTAATCAGGTTCAAGTGAATCCTAAAATAAACCTGACTTTTTCAAATG TACTTAGAACCACACTACGACAAGACCCCGACATTATTATGGTGGGGGAAATGCGTGATCAAGAAACGGTAGAAATTGGG CTTCGTGGCGCATTAACCGGTCACTTAGTACTATCGACACTGCATACCAATGACGCTATATCTAGTGTAGTGCGCTTACT CGATATGGGCGCGCCAGGTTACTTGGTGGCAAGTTCTCTTCGAGGCATTATTGCTCAGCGCTTGGTACGCCGAATTTGTG ATAATTGCACCACCTCTTATACGCCAACGGATGATGAAAAGGTGTGGTTGAACGGTATTGATGAAAATGCCGCAGACGTT GCCTTTAAACAAGGGCGTGGCTGTCAGAAATGTAATCAAACAGGATACAGAGGGCGAATTGGGGTTTTTGAGTTACTCGA AATGACTGAAAACATGATGAATTATTTAAAATCCAGTGATATCCAAGGCTTTAGTGATGCCGCGACTAAAAGCACAGGCT ATCGCTCTTTGCCTCAATCTGCTCTGACTTATGCAAAAATGGGCGTAACCAGTGTAGAAGAGGTGTTAAAACTGGTTGAG ATGGTAGCCCAAGATGCTCCCTCCTCTGAAATCACTGACGACACAACAGTGCAATAA Protein sequence : MNKPRVRLGDLLVQHNLISADELMTALSEQKSTGRKLGATLISMGLVTEHQMLELLSRHLNVPLIDIDQYRVNQQAVLLL PEIQARRYRALVIDDKGDSLLVAMSDPADLTAVDHLSETLNRQIELAVVSEQQLFTAYDTFYRKTQEIASFAQELAEEYD TEDNFNIELGGAGDQDTTVARLLQSIFEDAVIAKASDIHIEPDENQLRIRQRVDGVLQETVIPEKSIAAALVLRLKLMAG LDISEKRLPQDGRTQIKVKGHKIDVRLSTMPVQGGESVVMRLLDQSAGILTLEQTGMPSAQLTRFRNLLRRPHGMILVTG PTGSGKTTTLYGALSELNTAKSKIITVEDPVEYRLPRINQVQVNPKINLTFSNVLRTTLRQDPDIIMVGEMRDQETVEIG LRGALTGHLVLSTLHTNDAISSVVRLLDMGAPGYLVASSLRGIIAQRLVRRICDNCTTSYTPTDDEKVWLNGIDENAADV AFKQGRGCQKCNQTGYRGRIGVFELLEMTENMMNYLKSSDIQGFSDAATKSTGYRSLPQSALTYAKMGVTSVEEVLKLVE MVAQDAPSSEITDDTTVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-83 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-83 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ambt_17200 | YP_004468747.1 | type II secretion system protein E | VFG0182 | Protein | 6e-89 | 44 |
| ambt_17200 | YP_004468747.1 | type II secretion system protein E | VFG2048 | Protein | 9e-83 | 44 |
