Gene Information

Name : ambt_17010 (ambt_17010)
Accession : YP_004468709.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3840050 - 3841195 bp
Length : 1146 bp
Strand : -
Note : COG4584 Transposase and inactivated derivatives

DNA sequence :
ATGCGACAAAACCATAAAGCAGGTGAAAAACTGTTTGTTGATTACTGCGGCCCAACTATGAATATTGTTGATGCTAGTAC
AGGTGAATACCGTACAGCTCAAGTGTTTGTCGCAGTTATGGGCGCATCTAATTATACGTATGCGGAGGCAACGTATAGCC
AAAAGCTAGAAGATTGGGTGATGAGTCATGCTCGTTGTTTTGAGTTTCTTGGTGGTGTGCCAGAGCTGGTAATCCCTGAC
AACTTAAAAAGTGCGGTAACTAAACCTTGTCGATATGAGCCTGATTTAAATCCAACCTACCAACAATTGGCGACACACTA
CAATACGGTCATTGTGCCTGCTAGACCTTATAAGCCCAAGGATAAAGCCAAAGCAGAAGTGGGTGTGCAAATTGTCGAAC
GCTGGATAATGGCACGGCTTCGCAATGAAAGCTTCTTTAGCTTGCGCCAATTAAACCTAAAGATACAAAAACTGCTTGTC
GACTTAAACCAGCGGAAAATGAAGAAGCACCCTGGTTCAAGGCTCAGTCAGTTTGAATCCATTGATAAACCTGCTCTCAA
ACCACTACCCACACAGGCTTACAGTTACACCTTAGTCAAACAAGTAAGCGTGCATATTGATTATCATGTCGAAGTTGAAA
AACACTACTACTCAGTACCTCATACCTTGATCAAACAAAAGCTTGAAGCCCATGCCACAGGTCAACTGGTGACACTTTAC
CATCAGGGTGTTCAAGTAGCCGTTCATCCAAGATCACACCGAGAAGGTGCACACACTACGCTTGATCTACATATGCCAAT
AGCTCATCAAAAGCAGCAGCAATGGACACCACAACGGTTCGAGCGTTGGGCAGCTAAGTTCGGTGGTTCAACGGAGCAGT
TTGTTATGCAATTGATGCAAGCTAAAAAGCATCCAGAACAAAGCTACCGTGCTTGTATGGGGTTATTAAGCCTAGGTAAG
AAGTTTACTGACCAACGTCTTGAAGCAGCCTGTCATCGCGCATTAGCCACAGGTGTTACTCGCGTAAAACAAGTAAAAAA
CATTTTAGAAAAGGGCTTGGATAAGCAACCCTTGCCACAAGCTCAAGGTGATTTACTACAAGATATTGATCATAAAAATA
TCCGCGGCAACAACTATTACCATTAA

Protein sequence :
MRQNHKAGEKLFVDYCGPTMNIVDASTGEYRTAQVFVAVMGASNYTYAEATYSQKLEDWVMSHARCFEFLGGVPELVIPD
NLKSAVTKPCRYEPDLNPTYQQLATHYNTVIVPARPYKPKDKAKAEVGVQIVERWIMARLRNESFFSLRQLNLKIQKLLV
DLNQRKMKKHPGSRLSQFESIDKPALKPLPTQAYSYTLVKQVSVHIDYHVEVEKHYYSVPHTLIKQKLEAHATGQLVTLY
HQGVQVAVHPRSHREGAHTTLDLHMPIAHQKQQQWTPQRFERWAAKFGGSTEQFVMQLMQAKKHPEQSYRACMGLLSLGK
KFTDQRLEAACHRALATGVTRVKQVKNILEKGLDKQPLPQAQGDLLQDIDHKNIRGNNYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-119 61
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 7e-119 61
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 4e-119 61
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 3e-94 52