Gene Information

Name : ambt_15575 (ambt_15575)
Accession : YP_004468427.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3532632 - 3533600 bp
Length : 969 bp
Strand : -
Note : COG0582 Integrase

DNA sequence : 
ATGAAATCAATGTTTATGCAAATGGTGGTTCAACATATGCGAAATCGCCGTTACGCTAAGCGCTCTATACAGCTTTATAG
TGGTTGGATTGTTAGTTATATCCGGTTTCACAATACTAGGCATCCTGCCGAGATGGGAGACAAAGAAGTAGAGTTGTTTC
TATCTCACTTAGTGAATAAAAAGAATGTAGCGCCGGCTACTCAAGCCAGCGCACTCAATGCGTTGGCATTTCTTTATCGA
GACATACTAGAAAAGCCTCTTTCCTTGAGTCTTGATTTTGTTACAAGTCGCAGGCAAGCCAAGTTACCTGTTGTGCTTAC
GCAAGACGAAGTGGTAGCGCTGTTTGCTCAACTTCCTGCTCATTTAAAGTTACCTATTTCGTTACTTTATGGAAGCGGGT
TACGTTTAATGGAGGCTGTGAGGTTGCGTGTAAAAGACATTGATTTCGACTACAACGCTATTCGAATATGGGATGGTAAA
GGCGGCAAACATCGTGTTGTTACTTTAGCATCAGAGCTAAAACCTGGGCTTAATCGGCAAATAAGTGTAGTTGAAAGTTA
CCTTATTGCTGATTTAGATAACCCTAGTTACCAAGGGGTATATTTGCCCCATCGCTTACGTGTTAAATATCAAAATGCGC
CTAAAGAACTTGGATGGCATTATCTTTTTCCTTCTGCGCGTTTATCGGTTGATCCCGAGAATGGAAAAACGCGTCGACAT
CATATTGATGAATCAAGCATACAAAAGGCGATAAGAATAACCGCAAGTGCGTGTGGGCTTAAAAAGAAGGTTACGCCGCA
TACCTTACGACATTCATTTGCTACTCACCTTTTACAGTCGGGTGCCGACATTCGTACTGTGCAAACGCAACTTGGTCATT
CTGATGTGAAAACTACGCAAATTTACACTCATGTATTACAACAGGGGGCGCAAGGGGTAGTTAGCCCGCTTTCCCGTGTT
TTAAAATAG

Protein sequence : 
MKSMFMQMVVQHMRNRRYAKRSIQLYSGWIVSYIRFHNTRHPAEMGDKEVELFLSHLVNKKNVAPATQASALNALAFLYR
DILEKPLSLSLDFVTSRRQAKLPVVLTQDEVVALFAQLPAHLKLPISLLYGSGLRLMEAVRLRVKDIDFDYNAIRIWDGK
GGKHRVVTLASELKPGLNRQISVVESYLIADLDNPSYQGVYLPHRLRVKYQNAPKELGWHYLFPSARLSVDPENGKTRRH
HIDESSIQKAIRITASACGLKKKVTPHTLRHSFATHLLQSGADIRTVQTQLGHSDVKTTQIYTHVLQQGAQGVVSPLSRV
LK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 5e-44 46
int1 YP_005160012.1 integrase Not tested Not named Protein 1e-48 45
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 5e-59 45
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 5e-59 45
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 2e-59 45
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 5e-59 45
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 7e-59 45
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 2e-59 45
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
intI YP_001844881.1 integrase Not tested AbaR20 Protein 3e-59 45
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 2e-59 45
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 3e-59 45
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 3e-59 45
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 2e-59 45
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 3e-59 45
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 2e-58 44
intI1 AAK02045.1 integrase Not tested SGI1 Protein 2e-58 44
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 2e-58 44
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 2e-58 44
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 2e-58 44
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 2e-58 44
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 2e-58 44
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 2e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_15575 YP_004468427.1 integrase VFG1028 Protein 3e-59 45