Gene Information

Name : glnA (ambt_01485)
Accession : YP_004465653.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 358138 - 359547 bp
Length : 1410 bp
Strand : -
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCAGTAGAAAAGGCATTAGAGCTGATTAAAGAAAGTGAAGCGAAATTTGTTGATTTGCGTTTTACTGATACTAAGGG
CAAGGAACAACACGTATCGATTCCTGCTGCTACGGTAGACGAAGAGACATTTGAAGAAGGTAAAATGTTCGATGGTTCTT
CAATTGCAGGCTGGAAAGGCATTAATGAATCAGACATGGTACTTATGCCTGATCCTACGAGTGCGGTAGTTGACCCATTC
GCAGAAGAGACTCAAGTTAATATTCGTTGTGACATCCTAGAGCCTTCTACAATGGAAGGTTACGAGCGTGATCCACGTTC
AGTTGCGCGCCGTGCAGAAGAATACCTAAAATCTACCGGCATCGGCGACACAGTATTCTTCGGTCCAGAGCCAGAATTCT
TCCTTTTTGACGATGTTAAATTCCACACAGACATGGCTGGCTCTTTCTACAAGATTGATGCTGCTGAAGCAAAATGGAAC
TCAGGCGCTGATTTTGAAGGCGGAAACATGGGTCACCGTCCTGGTGTTAAAGGCGGTTACTTCCCAGTTCCTCCAGTAGA
TTCAGCGCACGACATTCGTGCAGCAATGTGCTTAGTAATGGAAGAAATGGGCTTAGTTATTGAAGCGCATCACCATGAAG
TGGCTACTGCTGGTCAAAACGAAATCGCTTGCGAATTCAACACACTAGTAACGAAAGCAGATGAAATCCAAGTTTATAAG
TATGTAGTACATAATGTAGCTCACGCTTATGGCCAAACTGCTACGTTCATGCCTAAGCCTCTTGTAGGTGATAACGGTTC
TGGTATGCACTGTCACCAATCAATCGCTAAAGATGGCGTAAACATCTTTGCGGGTGATAAGTATGCTGGTCTGTCTGAAG
AAGCGCTTTTCTACATTGGCGGTATTATTAAACACGCTCGTGCAATCAACGCTTTTGCAAACGCATCAACCAACTCTTAC
AAGCGTTTGGTTCCAGGATTTGAAGCACCGGTAATGCTTGCATACTCTGCACGTAACCGTTCTGCATCTATCCGTATTCC
ATACGTAACTAGCGATAAAGCGCGTCGTATCGAAGTACGTTTCCCTGACCCAACAGCTAACCCATACCTTGCTTTCTCAG
CAATGCTTATGGCTGGCCTTGACGGTATTAAGAACAAGATCCATCCTGGCGATTCTATGGATAAAGACTTGTACGACTTA
CCACCAGAAGAAGCGGCAGAAATTCCAACCGTTGCTAGCTCGCTAGAAATGGCACTAGAAGCATTGGATAACGACCGTGA
GTTCCTTAAAGCGGGTGGCGTTATGACTGACGACATGATTGATGCATACATCGATCTTAAGTCTGAAGAAGTAACTACGC
TTGCCATGACAACTCACCCAGTTGAGTTCGACATGTACTACAGCGTTTAA

Protein sequence :
MSVEKALELIKESEAKFVDLRFTDTKGKEQHVSIPAATVDEETFEEGKMFDGSSIAGWKGINESDMVLMPDPTSAVVDPF
AEETQVNIRCDILEPSTMEGYERDPRSVARRAEEYLKSTGIGDTVFFGPEPEFFLFDDVKFHTDMAGSFYKIDAAEAKWN
SGADFEGGNMGHRPGVKGGYFPVPPVDSAHDIRAAMCLVMEEMGLVIEAHHHEVATAGQNEIACEFNTLVTKADEIQVYK
YVVHNVAHAYGQTATFMPKPLVGDNGSGMHCHQSIAKDGVNIFAGDKYAGLSEEALFYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPYVTSDKARRIEVRFPDPTANPYLAFSAMLMAGLDGIKNKIHPGDSMDKDLYDL
PPEEAAEIPTVASSLEMALEALDNDREFLKAGGVMTDDMIDAYIDLKSEEVTTLAMTTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-108 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004465653.1 glutamine synthetase VFG1399 Protein 6e-117 51