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Name : lysS (ambt_12755) Accession : YP_004467873.1 Strain : Alteromonas sp. SN2 Genome accession: NC_015554 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2868860 - 2870416 bp Length : 1557 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGACCAACAAACCGACGAAAATAAATTAATTGCTGAGCGCCGAGCAAAACTAAGCGCAATTCGTGAGGAGTGCCG TGCAAATGGCTTCCCAAACAGCTTCCGTCGTGAAAACTATGCTGACGAACTTCAAGGCAAGTTCGGTGAATTAGATAAAG AAACCTTGCAAGAGCAGGGTAATAAAGTAAGCATTGCTGGCCGTATTATGGCTAAGCGTGGCCCGTTTATGTTGCTTCAA GACATGACTGGTCGCATTCAAGCTTACGCTGATAAAGACACCCAAAAAGCCCTTAAAGCGCAGTACGGTGCGTTAGATAT TGGTGACATTATTGGTGTTGCTGGTGTTTTGCATAAGTCGGGTAAAGGCGACTTATATGTGAACACGGAAAAGTATGCAT TGCTAACAAAAGCGCTGCGCCCTCTACCAGAAAAGTTCCATGGCCTAAGCGACCAAGAAACCAAATATCGTCAGCGTTAC GTTGACCTTATTACCAGCGAACAAACGCGAAAAACCTTTATGATCAGAAGTAAGATTGTAAATGGTATTCGTAACTACCT TACTCAGCGCGACTTCCTTGAAGTAGAAACGCCTATGCTGCAGGTGATTCCAGGTGGTGCAACTGCGAAGCCGTTTGTTA CACACCATAATGCGTTAGACATTGATATGTACTTACGTATTGCCCCAGAGCTTTATTTGAAGCGCTTGGTAGTAGGTGGT TTCGAGCGCGTGTTCGAAATTAACCGTAACTTCCGTAACGAAGGGCTTTCAACACGTCATAACCCAGAGTTCACCATGTT GGAATTTTATCAGGCCTATGCTGATTTCAACGACCTGATGAACCTAACAGAAGACATGTTGCGTACTCTTGCCGAAGATA TTTTAGGTTCTAGTATTATTACTAACACCACCAAAGATACCGACGGAAACGTGGTTTCAGAAGTACAGTATGACTTTGGT AAGCCGTTTGAGCGCTTAAGCATGGGCAACGCCATTTTGAAATACTGGCCAGAAGCTAATGAAGCCGCTATTCGCGACCC AGAAGCGAACCTTGATGCACTTAAAGCCATGGCGAAACAGTTGCATATTAAAGAGCCTGAAGTTGATGGTATTTGGGGTG CTGGTAAATACTTATGTGAAATCTTCGAAGCCACTGCGGAAGAGAAGCTTGAACAGCCAACGTTTATTACCGAATATCCG TGGGAAGTATCGCCACTTGCTCGTCGTAACGATGAAAACCCATTCATTACCGACAGGTTTGAATTCTTCGTTGGCGGCCG TGAGCTAGCCAACGGTTTCAGCGAGTTAAACGACTCTGAAGATCAAGCTAAGCGTTTCTCTAAGCAAGTTGAAGAGAAAG ATGCAGGTGATGATGAAGCGATGCACTACGACGAAGATTATATTCGTGCGTTAGAGTATGGTTTGCCGCCTACGGCCGGT GAAGGTATTGGTATTGACCGTTTGGCCATGCTATTTACTGACAGCCCAACGATTAAAGACGTGATTTTATTCCCGCATAT GAAACCTGAAGTGTCTAAAGGCGCCGAAGAAGAATAA Protein sequence : MTDQQTDENKLIAERRAKLSAIREECRANGFPNSFRRENYADELQGKFGELDKETLQEQGNKVSIAGRIMAKRGPFMLLQ DMTGRIQAYADKDTQKALKAQYGALDIGDIIGVAGVLHKSGKGDLYVNTEKYALLTKALRPLPEKFHGLSDQETKYRQRY VDLITSEQTRKTFMIRSKIVNGIRNYLTQRDFLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADFNDLMNLTEDMLRTLAEDILGSSIITNTTKDTDGNVVSEVQYDFG KPFERLSMGNAILKYWPEANEAAIRDPEANLDALKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEKLEQPTFITEYP WEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDSEDQAKRFSKQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAG EGIGIDRLAMLFTDSPTIKDVILFPHMKPEVSKGAEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-131 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004467873.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-132 | 55 |
