Gene Information

Name : ambt_10145 (ambt_10145)
Accession : YP_004467357.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2261736 - 2262431 bp
Length : 696 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGCAGGACGTATTACATTGCCGCAAAATCTGTAAAATTTATCAAGAAGGCGACAACAGTACGCCTGTTTTAAATAACAT
TTCACTTTCTATCAATGCAGGTGAGCATGTTGCCATTTTAGGTAGCTCTGGGTCAGGAAAAAGTACCTTGCTGCATTTGC
TTGGCGGGTTAGACACACCCACAAGCGGTGAGGTGTGGTTTAAAGGCGAGTCGCTTACACAACTAAATGCTAAACAACTT
GCCGCCTTGCGAAACAAAGAAATGGGCTTTATTTACCAATTCCATCATTTGCTAGGTGAATTTACTGCACTTGAAAACGT
TGCCATGCCCCTTCGCATTGGCGGCGAGAGTGCGAGTACCGCTAATGCGAAAGCAAACGCTTTACTTAACGATGTAGGGC
TTTCTCATCGTGCAGATCACTTGCCTAGCGCGCTCTCAGGCGGCGAACGCCAACGGGTCGCCATCGCTCGAGCATTAGTC
GCATCACCGTCAGTTGTGCTTGCCGATGAACCAACCGGTAATTTAGATGCCACCACAGGTGAGCAGATTTATCAGCTGTT
AAAACGTTTAAGCGAGCAAAAACAAACTGCCTTTGTGGTAGTAACCCACGATATTACCCTTGCTAACCGTATGGACAGAG
TGCTTCGCATTAAAGATGGTGAACTGCTTAACGCAGCAACAGAGGAGCAACGCTAG

Protein sequence :
MQDVLHCRKICKIYQEGDNSTPVLNNISLSINAGEHVAILGSSGSGKSTLLHLLGGLDTPTSGEVWFKGESLTQLNAKQL
AALRNKEMGFIYQFHHLLGEFTALENVAMPLRIGGESASTANAKANALLNDVGLSHRADHLPSALSGGERQRVAIARALV
ASPSVVLADEPTGNLDATTGEQIYQLLKRLSEQKQTAFVVVTHDITLANRMDRVLRIKDGELLNAATEEQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_10145 YP_004467357.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-37 49
ambt_10145 YP_004467357.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-32 47