Gene Information

Name : ambt_08340 (ambt_08340)
Accession : YP_004466998.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1878381 - 1879025 bp
Length : 645 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence : 
GTGATAAAAATAATCCTAGCAGATGACCATGATTTGGTCAGAAGAGGGATCCGCCGAATTCTGGAAGATGTCGTAGATTT
TTCAATCATAGCTGAAGCTAAAAATGGCGAAGATGCCGTACAGCTATGTCGAAAAAACGCTCCAGATGTGGTGCTCATGG
ACGTAAATATGCCCGGTATTGGCGGGCTAGAAGCAACCAAACGCATTGTGCGGATGTCAGAGAACACCCGCGTAATTTGT
TTGTCTATGCATAAAGAAAGCCCCATACCTATGCAGGTAATGAATGCTGGCGCGTTCGGCTTCTTAACGAAAGATGCCGA
ACCTGAAGAAGTTATTCGTGCCATTCATAAAGTGGTTGGTGGGCAAAAGTATATCGATAGTGAAGTTGCGAACAGCATCG
CCATCGATAAGCTTTCCCCAAATTCAGACAATCCGTTCAATGACTTATCAGATAGAGAGTTAAGTATTGCGCTTCGCCTC
ACCAAGGGCAAGCGTGTACCTGATATTGCTACTGAACTAAGCATTAACGCAAAAACCGTCAATACATACCGTTATCGTAT
GTTTGAAAAGTTAGGCGTAACCACTGATGTGGAATTAACCCACTTAGCGCTTCGCCACAAACTCATCGATTCGAATTTGC
TTTAG

Protein sequence : 
MIKIILADDHDLVRRGIRRILEDVVDFSIIAEAKNGEDAVQLCRKNAPDVVLMDVNMPGIGGLEATKRIVRMSENTRVIC
LSMHKESPIPMQVMNAGAFGFLTKDAEPEEVIRAIHKVVGGQKYIDSEVANSIAIDKLSPNSDNPFNDLSDRELSIALRL
TKGKRVPDIATELSINAKTVNTYRYRMFEKLGVTTDVELTHLALRHKLIDSNLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-46 47
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-46 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_08340 YP_004466998.1 two component LuxR family transcriptional regulator VFG1889 Protein 3e-50 47