Gene Information

Name : ambt_08320 (ambt_08320)
Accession : YP_004466994.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1873999 - 1874493 bp
Length : 495 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGGCAACAGTTACGTTTCAAGGTAATTCAGTTTCAACTGTAGGTTCGCTTCCAGAAGTTGGGCAGCAAGCCCCAGACTT
CACATTAGTAAAAGCGGATTTAGGTGAAGTAACCCTCGCTGATCTTAAGGGTAAACGCGTTATTCTTAACATTTTCCCTT
CTATCGATACAGGCACGTGTGCAACGTCAGTGCGTAAATTCAATGAACAAGCAGCTGGTCTAGACAATACACAAGTTATT
TGCGTATCTGCTGACTTACCGTTTGCAGCTGGCCGCTTTTGTGGTGCAGAAGGCATTGAAAATGTGATTACCGGTTCTAC
TTTCCGTACAAGTTTTGGTGACGACTATGGTGTGGCGTTCACTTCTATGCCGCTAACTGGTCTGCTATCACGAACAGTCG
TTGTGATTGATACCGACGGTAAGGTACTTTATACCGAGCAAGTGGCTGAAACCACGGAAGAACCAAACTACGATTCAGCA
ATGGCTGCTTTGTAA

Protein sequence : 
MATVTFQGNSVSTVGSLPEVGQQAPDFTLVKADLGEVTLADLKGKRVILNIFPSIDTGTCATSVRKFNEQAAGLDNTQVI
CVSADLPFAAGRFCGAEGIENVITGSTFRTSFGDDYGVAFTSMPLTGLLSRTVVVIDTDGKVLYTEQVAETTEEPNYDSA
MAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-31 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-31 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-31 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_08320 YP_004466994.1 peroxiredoxin VFG0087 Protein 3e-32 45