Gene Information

Name : ambt_05430 (ambt_05430)
Accession : YP_004466432.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 1247313 - 1248830 bp
Length : 1518 bp
Strand : +
Note : COG4584 Transposase and inactivated derivatives

DNA sequence :
ATGAGAAAAATTAAAGACGTCCTGCGTCTCAAATTCGAAGTAGGATTAAGTCATCGAGACATCGGCCAATGCTTAAGTCT
CGGTCCTTCAACCGTGAGTGAAATACTCTCGCGCTTTAAATCCAGTGATTTATCGTGGCCGTTACCGGAAGCGATCAACG
ATAAAACGCTCGAGGCTCAGTTGTATAACACTGGTCCCGTTCAGCGCCAAAAACGGCTGCCTGACTTTATGCTTATGCAG
CAAGAGTTGAAGCGTAAAGGCATGACTAAGCTGTTACTGTGGGAAGAATATTGCGCCGAGGATAGTGCGTCAGCTTATGG
TTACACGCAGTTTTGCGAGCATTATCAGCGATGGCTTAAAAAGCAGAAGCGTAGTATGCGCCAGCACCATATTGCGGGCG
ACAAGTTGTTTATTGACTACTGCGGGCCGACAGTACCTATTGTTAATCCCGATACAGGCGAAGTGCGTTATCACGCACAA
ATCTTTGTAGCGACTTTAGGTGCGACCAACTACACGTATGTTGAAGCTGGCCGCTCACAACGTGAAGAAGACTGGATAAT
GGCGCACGTAAGAACGTTCCGCTACCTTGGCGGTGTACCCCGTTTACTTGTGCCGGATAACCTGAAATCAGCCGTTACCA
AAGCCCACCGTTACGCACCCACGATGAATGAAAACTACGCCAAAATGGCGCGGCATTATGGCTGCGCCATCGTTCCGGCA
AGACCTTACAAACCGAAGGATAAGGCCAAAGCAGAAAATGCGGTACTGATTGTTGAACGCTGGATATTAATGCGATTACG
CCGGGAGTGCTTTTACACCTTAGCGAGCCTTAACGCACGTATCAAAGTGTTAATGGAAGAGTTAAATAATCGGCCGCAGC
GCTTACATCCAGGCTCTCGCCGTGAGCAGTTTGAACTGCTCGATAAGCCCGCGTTAATGCCATTGCCTGGCACCACGTAT
GAGTACATAGACAGTAAACGGGCCAAAGTTGGGCCGGATTACCATGTGCTGTACCAAAAGCATGCTTACTCTGTACCGCA
CACCTTAGTGGGCAACACAGTGACCATCGAAGCTAGTGGCAGCGTGATTAGCATCTATCACCAAAATCAACTGGTGACAC
AGCACGCTAAATCAGCAAAAGACGGCGGCTTCTCAACGCAAAAAGAACACATGCCGGACAGCCATGTAAAACAGCGCTTC
AGCGCTGAACGCTTATTGCACTGGGCTGAGAATATTGGTGTAGGTACGCGCGGTGTGGTGCAGTGGCACATCCATAGCCG
TCAACATCCAGAGCAAGCGATTAAAAGCTGCCTAGCCATTCTAAATCTCACTAAACAGCATGGTGCTGCGCGACTTGAAG
CCGCTTGCCAAAAGGCGTTACTGCTAGAACGCCCTCACAGAAGCGTTGTGATGAACTTACTCAAACATCACCAAGAAAGC
GTACCGAGCACCGCTGTCGAGCAAGATGAACAACCTGTTACCCACCACAATATCCGCGGCCAATATTACTATCAATAG

Protein sequence :
MRKIKDVLRLKFEVGLSHRDIGQCLSLGPSTVSEILSRFKSSDLSWPLPEAINDKTLEAQLYNTGPVQRQKRLPDFMLMQ
QELKRKGMTKLLLWEEYCAEDSASAYGYTQFCEHYQRWLKKQKRSMRQHHIAGDKLFIDYCGPTVPIVNPDTGEVRYHAQ
IFVATLGATNYTYVEAGRSQREEDWIMAHVRTFRYLGGVPRLLVPDNLKSAVTKAHRYAPTMNENYAKMARHYGCAIVPA
RPYKPKDKAKAENAVLIVERWILMRLRRECFYTLASLNARIKVLMEELNNRPQRLHPGSRREQFELLDKPALMPLPGTTY
EYIDSKRAKVGPDYHVLYQKHAYSVPHTLVGNTVTIEASGSVISIYHQNQLVTQHAKSAKDGGFSTQKEHMPDSHVKQRF
SAERLLHWAENIGVGTRGVVQWHIHSRQHPEQAIKSCLAILNLTKQHGAARLEAACQKALLLERPHRSVVMNLLKHHQES
VPSTAVEQDEQPVTHHNIRGQYYYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 4e-144 56
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-109 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 1e-108 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 4e-109 47