Gene Information

Name : ambt_04955 (ambt_04955)
Accession : YP_004466341.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1138529 - 1139194 bp
Length : 666 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATACTGTTAGTTGAAGACGATAAGCCTTTGTCCAACGCGCTTAAAGTTTCATTAAGAAAGGCAAACTATACTGT
AGACTGTGTCTACGATGGTGCCAGCGCAATAAGTACACTTCGCCCATCGCAAAATGATATTGTCATTTTGGATCTAGGTC
TACCAGACCAGGATGGATTAATCGTTCTCAAGAGTATTCGAAAAACTAATCCAGTACTGCCAGTCTTAATTCTGACCGCA
AGAGACAAGACCTCTGACAAAATATCAGGGCTAGATGCGGGTGCAGACGATTACCTCCCCAAACCCTTTGAAATTGATGA
GTTGCTGGCGCGCTTACGGGTTTTAGAGCGCAGATTAGGTACGTCTTCAGAAAGTGTGATCACTGTGCAGAACGTCAGCC
TTGATACAAAGCACCATACATTGACTATTGATAGTGACATAGTACATCTTCCGCGTAGAGAGCTTATGCTTTTGAAAGCG
CTAATTGAAAACGCGGGTCGCATATTGAGTAAGCATCAACTTGAGAGCAAACTCTATGAATGGGGTGAGGAAGTTTCAAG
CAATACAATAGAAGTGCATATCAGCAATTTAAGAAAAAAGATGCCAGAAAACTTCATTCGAACCATTAGAGGCGTAGGGT
ATTGCATATCCAACTCTGGAGATTAA

Protein sequence : 
MRILLVEDDKPLSNALKVSLRKANYTVDCVYDGASAISTLRPSQNDIVILDLGLPDQDGLIVLKSIRKTNPVLPVLILTA
RDKTSDKISGLDAGADDYLPKPFEIDELLARLRVLERRLGTSSESVITVQNVSLDTKHHTLTIDSDIVHLPRRELMLLKA
LIENAGRILSKHQLESKLYEWGEEVSSNTIEVHISNLRKKMPENFIRTIRGVGYCISNSGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_04955 YP_004466341.1 response regulator BAC0487 Protein 2e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ambt_04955 YP_004466341.1 response regulator VFG0473 Protein 2e-34 44