Gene Information

Name : Mahau_0342 (Mahau_0342)
Accession : YP_004462380.1
Strain : Mahella australiensis 50-1 BON
Genome accession: NC_015520
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 380289 - 380972 bp
Length : 684 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dhd:Dhaf_3739 two component transcriptional regulator, winged helix family; PFAM: response regulator re

DNA sequence :
ATGGCCGGTTTTAGAATAATGGTGGTAGAGGATGAAGAAAGGATGCGGCAATTGTTGCACCTTTATATGCAAAACGAAGG
ATTTGAGGTGGTAGATGCTTATGATGGGCAACAAGCCCTTGATCTCTTTGAGAAGTATCCGATGGACCTTGTGATACTCG
ACGTAATGCTGCCTAATGTAGACGGATGGACGGTATGTCGCCAGATAAGGCAAGGCTCTCAAGTACCCATTATAATGCTT
ACAGCCCGCGGCGAAGAAAACGATAAACTCTTCGGCTTCGATCTTGGTGTGGACGACTATGTGGTAAAGCCATTCAGCCC
CAAAGAACTAGTGGCCCGTGTAAAAGCTCTGCTAAAACGCAGCCGCGGCAACGCAAATGCGCAGGACCGCGTGATCAAAT
ATGAAAGTTTATCAATAGAACCATTATCGCGTCGGGTAACCATAAACGACGAAGACATCATTCTTACGCCAAAAGAATTC
GATCTTCTCTTTTTCCTAGCCTCCCATCCCGGACAAGTGTTCTCACGCGAACAATTGCTACATCATGTATGGGGATATGA
TTTTTATGGTGATTCGCGTACAGTAGACGCGCATGTCAAAAACCTGCGCAGCAAGCTAGGCAATTATGGCCGTTATATAG
TTACCGTATGGGGAGTGGGATACAAATTCGATGATTCGGTTTAA

Protein sequence :
MAGFRIMVVEDEERMRQLLHLYMQNEGFEVVDAYDGQQALDLFEKYPMDLVILDVMLPNVDGWTVCRQIRQGSQVPIIML
TARGEENDKLFGFDLGVDDYVVKPFSPKELVARVKALLKRSRGNANAQDRVIKYESLSIEPLSRRVTINDEDIILTPKEF
DLLFFLASHPGQVFSREQLLHHVWGYDFYGDSRTVDAHVKNLRSKLGNYGRYIVTVWGVGYKFDDSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-42 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 6e-46 47
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 5e-48 47
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 4e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 4e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 3e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 5e-45 46
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 3e-39 45
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_010400.5986590.p0 Protein 2e-39 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_011595.7057856.p0 Protein 1e-39 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_010410.6002989.p0 Protein 1e-39 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator CP001918.1.gene3444. Protein 3e-37 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 2e-27 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 6e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 3e-46 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 1e-36 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator BAC0039 Protein 5e-38 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 4e-38 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 5e-38 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 5e-38 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 7e-34 42
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator DQ212986.1.gene4.p01 Protein 2e-40 42
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator BAC0596 Protein 7e-38 42
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 7e-38 42
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 4e-45 41
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-35 41
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 9e-43 41
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 9e-43 41
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 3e-32 41
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator EU250284.1.orf4.gene Protein 2e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator VFG1389 Protein 9e-34 44
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-42 43
Mahau_0342 YP_004462380.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-42 43