Gene Information

Name : TepRe1_0923 (TepRe1_0923)
Accession : YP_004460397.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Unknown
Product : recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 989788 - 991269 bp
Length : 1482 bp
Strand : +
Note : KEGG: csh:Closa_2762 resolvase domain protein; PFAM: Recombinase; Resolvase, N-terminal; SMART: Resolvase, N-terminal

DNA sequence :
ATGTTTCATATTTTTTTAAGTCCCTACTTGACACAAGGTGATGACGGAAAATCAGCAACCAATACAAAAAAGAGAGATGA
TTTTAATGCCATGATCGAAGATTGTATGGCTGGGAAAATAGATATGGTTATAACAAAATCTGTCAGCAGATTTGCAAGAA
ATACAGTAGATTCTTTACAAACTATAAGGAAACTAAAAGAAAATAATATAGCCATATTTTTTGAAAAGGAGGGTGTTAAT
ACCTCAGAAAGTACAGGAGAATTACTTATTACTATCTTAAGCAGCCAAGCCCAAGAGGAAAGCCGAAACCTAAGTGAAAA
TACAAAATGGGGCATTGTAAGAAGATACGAAAATGGAATCATCTCAGTTAACCATAAAAAATTTATGGGGTACACCAAAG
ATAAAAAAAGTGGTGAACTGGTCATATTACCTGAACAAGCAGAGATAGTAAGACGTATTTTTAGGATGTACTTAGAAGGC
AACAGTATACTAGAGATAACCAGAGCCTTAGAGGCAGATAAAATTAAAACGGTTACAGGGAAAGATAAATGGTATACCGG
TGTGATTGAAAAAATGTTAGCCAATGAAAAATATATGGGAGATGCCTTAATGCAGAAGACCTACACTGTAGATTTTCTGA
CAAAGAAACGAGTGAAGAACAACGGAATCGTACCACAATATTATATCGAAGATAATCATGAGGCCATTATACCAAAGGAA
TTATTTTATAAAGTACAGGAAGAAAAGGCAAGAAGAGCCAGCCTGAATAAATCAGCAATTACAAGAAAAGCAAATAAATT
AAAGAAAGAAAAAAGCAAATTCAGCTCAAAATATGCATTAACAGAAATCTTGGTATGTGCCGAATGCGGACATCCATATC
GCAGACAGACATGGTCAAAATATGGACAAAAAAGTGCAGTGTGGAGATGTGAGAATAGGCTAAAGAATGGTACAAAAGCA
AGTTGCAAGCACTCACCTACATTAAAAGAAGAACCACTGCATAATACCATAATGACAGCCATTAATAATGTAGTAGAAAA
CAATGGAGATTTTATAGGGGCATTCAGAGAAAATGTCATCAGAGTCATAGGGGGTTATTCCACAAAAGATATTCCTACAA
AATATGATGAGCAGATTGAATCGCTGCAAAAAGAAATGCTAACATTAATTGAAGAAAACGCAAAACAAGGATCTGTAGCA
GAAGATTTCGACGATACATATAAAAGGATATCAGATCAGATAAACGAGCTTAAACAAGCAAAATTAAAGCTTGTTAGGGA
AAAGAAACAGGCAGATAGATACGAACAGCAACTAAAGGAAATAGACAGTACATTAAAGATAGTAAGACCACAGGTAAGAG
AGTTTGATGAGGATTTAGTAAGAAGATTAATAAAGATCATCAAAGTGAATAAGGGTGAAAAGCTGGAGATACAGTTCGAA
TCAGGTATAACCATGGAACAGATGGTAGATTATTATGATTAG

Protein sequence :
MFHIFLSPYLTQGDDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQTIRKLKENNIAIFFEKEGVN
TSESTGELLITILSSQAQEESRNLSENTKWGIVRRYENGIISVNHKKFMGYTKDKKSGELVILPEQAEIVRRIFRMYLEG
NSILEITRALEADKIKTVTGKDKWYTGVIEKMLANEKYMGDALMQKTYTVDFLTKKRVKNNGIVPQYYIEDNHEAIIPKE
LFYKVQEEKARRASLNKSAITRKANKLKKEKSKFSSKYALTEILVCAECGHPYRRQTWSKYGQKSAVWRCENRLKNGTKA
SCKHSPTLKEEPLHNTIMTAINNVVENNGDFIGAFRENVIRVIGGYSTKDIPTKYDEQIESLQKEMLTLIEENAKQGSVA
EDFDDTYKRISDQINELKQAKLKLVREKKQADRYEQQLKEIDSTLKIVRPQVREFDEDLVRRLIKIIKVNKGEKLEIQFE
SGITMEQMVDYYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 1e-100 48
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 4e-95 47
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 4e-95 47