Gene Information

Name : TepRe1_2530 (TepRe1_2530)
Accession : YP_004461936.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2647292 - 2648146 bp
Length : 855 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: toc:Toce_2206 pyridoxal phosphate synthase YaaD subunit; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGTCAAGTCAAATCAATGCTAAATTAATGGGTGGCGTCATAATGGATGTCACTACTCCGGAACAAGCCGAGATCGCCGA
ACAGGCCGGAGCTGTAGCGGTCATGGCTTTAGAGCGCGTACCTGCGGATATCAGAAAACAGGGCGGAGTTGCTCGCATGT
CAGACCCAAAAATTATTAAGGAAATTAAAGCAGCGGTATCAATACCCGTTATGGCCAAATGCCGAATTGGGCATTTCGTA
GAAGCCCAGATTTTAGAGGCATTAGGAATTGACTACATAGATGAAAGCGAAGTTTTAACTCCCGCGGACGAAGCCTTTCA
TATTGATAAAACTAAATTCAAAACACCTTTTGTATGTGGGGCCAGAAATCTCGGTGAAGCCCTCCGCCGTATAGGTGAAG
GGGCTGCCATGATTCGGACCAAAGGTGAAGCGGGTACCGGCAACGTAGTTGAAGCAGTAAAACACATACGAACCGTTATG
GGGCAAATCCGCAAACTTGCCAGCACGCCTGAAGAAGAGCTCATGAGTGCTGCCAAGGAGATGGGTGCTCCCTTTGACCT
AGTTAAGTATGTAGCCAAGGAAGGCAAACTTCCTGTTGTAAACTTTGCCGCCGGCGGCGTTGCAACTCCTGCTGATGCAG
CTTTACTAATGCAGCTGGGGTGCGACGGAGTATTTGTAGGTTCCGGTATCTTCAAATCTGCCAACCCTGAGAAAATGGCA
AAAGCCATAGTGGAGGCTGTTGCCAACTATAACAATCCTGATGTTTTAGCCAAAATATCCGAAAACTTGGGTGAGGCCAT
GCAAAGCATTGAAATAGATAAACTGGAAGACCACTATGCCGAGCGCGGGTGGTAA

Protein sequence : 
MSSQINAKLMGGVIMDVTTPEQAEIAEQAGAVAVMALERVPADIRKQGGVARMSDPKIIKEIKAAVSIPVMAKCRIGHFV
EAQILEALGIDYIDESEVLTPADEAFHIDKTKFKTPFVCGARNLGEALRRIGEGAAMIRTKGEAGTGNVVEAVKHIRTVM
GQIRKLASTPEEELMSAAKEMGAPFDLVKYVAKEGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSANPEKMA
KAIVEAVANYNNPDVLAKISENLGEAMQSIEIDKLEDHYAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-80 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-80 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-80 68