Gene Information

Name : TepRe1_2443 (TepRe1_2443)
Accession : YP_004461851.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 2533574 - 2535532 bp
Length : 1959 bp
Strand : -
Note : KEGG: drm:Dred_1191 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family A, palm domain; SMART: DNA-directed DNA polymerase, family A, palm domain

DNA sequence :
ATGACGATTCTGAGCATCGATATTGAAACCTATTCTAGCGTAGACCTCACCAAGTGTGGGGTTTACGCTTACACCCAAGC
GGAGGACTTTGAAATATTACTTTTTGGCTATGCCTTTAATAATGACCCAGTAGAGGTTATCGATTTAGCAAGTGGAGAGC
AGATTCCGGATGAAGTGACAAATGCCATAACAGATTCCGCAGTAATTAAAACAGCCTTTAATGCCAACTTCGAAAGAACC
TGCTTAGCAAAATATTTAAATAAACCCATGCCACCAGAAGAGTGGCGGTGCAGCCAGGCCCATGCTCTAACTCTAGGGCT
TCCTTTAAACCTTGCCGGGGTGGCCAAATGCTTAGGTTTAGCTGACCAAAAGATGAGCGAAGGAAAAGCACTCATTAGAT
ATTTTTCCATACCCTGCAAACCCACCAAAGCCAATGGTGGTAGGACTAGAAACCTTCCCCACCATGACAGGGAAAAATGG
GAAACCTTTAAAGCCTACTGTAAACAAGATGTGGTGGTGGAGCGAAGTATCCGTAAAAGATTAGAAAATTACCCTATGAC
TGATAAGGAACTAAAACTGTGGTCTTTAGACCAGAAGATCAATGACTATGGAGTGCGGGTAGACCGGCAGTTAGTAGAAA
ACGCCATCTGCTGTGATGGAATCCACCAAAAGGAATTAATGGCTGAAGCTATAGATCTAACTGGGCTTGAAAACCCCAAC
AGCCCGGCCCAGTTAAAGACTTGGCTTAAAGGTAACCACAACATCCAAGTAGACAGCCTATCTAAAGCCAATGTGGAAGA
ACTTTTAAATAAAATCAACCACCCCACCGTTACCCGAGTCTTGGAGCTAAGACAGGATATGTCCAAGACTTCGGTTAGGA
AATATGAGGCCATGGACAGAGCAATGGGTGGGGATGGGCGGATAAGAGGGCTGCTCCAATACTATGGAGCCAATCGCACA
GGCCGGTGGGCAGGCAGACTGGTGCAGGTGCAAAACCTGCCTCGAAACAACATGAAGGATTTGGATTTAGCTAGAAAACT
ACTGCTTGCCGGGGATTATGAAAGTTTGGAACTATTATTCGACAGTGTGCCGGATGTTTTATCCCAATTAATTAGAACAG
CCTTTGTCCCTTCCCCTGGCCATCGCTTTATTATATCTGACTTTAGTGCTATCGAAGCAAGGGTAATCGCTTGGCTAGCC
GGTGAGAAGTGGGTTGTTGATACCTTTAAAGGCCATGGCAAGATTTACGAAATGACCGCCAGTAAGATGTTTGGAGTGCC
TATGGAGCTTATCGTAAAAGGCAATCCAGAGTATGAGTTAAGACAAAAAGGGAAAGTAGCAGTTTTAGCATGTGGCTATC
AGGGGAGTGTTGGTGCTTTAAAAGCTATGGGAGCTTTAAATATGGGACTTAAAGAAGATGAGCTACCAGCCATTGTAGCT
GCTTGGCGAGAGTCTAACCCTAATATCGTAAAGCTGTGGTGGGATGTAGAAGATGCAGCTATAAGAGCCGTAAAAGACAG
GACTTCAATTACTATGCAGTATGGTCTTAAGTTCTACTACAAATCAGGAGTGCTGTTTATCAGACTCCCCTCTGGTAGAA
ATCTCGCCTATGTTAAGCCCAGGATTGAATTAGACACACGGTTTAACAAAGATAAATTAACTTACGAAGGTATCATGCTC
GGAAACAAATGGGCTAGGATTGACACCTACGGCGGGAAGCTCACAGAAAACATCATTCAGGCAATCGCCAGGGACTGTCT
AGCAGAATCCCTTTTAAGGCTAGATAAAGCCGGATATAAAATTGCCTTTCATGTCCATGATGAAGTGGTACTAGATGTCC
CCCAAGGCTTTGGCTCCCTCAAAGAAGTGGAGGAAATCATGAGCCAGGATATCAACTGGGCAAAAGGACTGCCACTTCGG
GCAGAAGGCTTTGAAACTAATTACTATATGAAAGATTAA

Protein sequence :
MTILSIDIETYSSVDLTKCGVYAYTQAEDFEILLFGYAFNNDPVEVIDLASGEQIPDEVTNAITDSAVIKTAFNANFERT
CLAKYLNKPMPPEEWRCSQAHALTLGLPLNLAGVAKCLGLADQKMSEGKALIRYFSIPCKPTKANGGRTRNLPHHDREKW
ETFKAYCKQDVVVERSIRKRLENYPMTDKELKLWSLDQKINDYGVRVDRQLVENAICCDGIHQKELMAEAIDLTGLENPN
SPAQLKTWLKGNHNIQVDSLSKANVEELLNKINHPTVTRVLELRQDMSKTSVRKYEAMDRAMGGDGRIRGLLQYYGANRT
GRWAGRLVQVQNLPRNNMKDLDLARKLLLAGDYESLELLFDSVPDVLSQLIRTAFVPSPGHRFIISDFSAIEARVIAWLA
GEKWVVDTFKGHGKIYEMTASKMFGVPMELIVKGNPEYELRQKGKVAVLACGYQGSVGALKAMGALNMGLKEDELPAIVA
AWRESNPNIVKLWWDVEDAAIRAVKDRTSITMQYGLKFYYKSGVLFIRLPSGRNLAYVKPRIELDTRFNKDKLTYEGIML
GNKWARIDTYGGKLTENIIQAIARDCLAESLLRLDKAGYKIAFHVHDEVVLDVPQGFGSLKEVEEIMSQDINWAKGLPLR
AEGFETNYYMKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 4e-156 53
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 2e-159 51
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 5e-160 51