|
Name : TepRe1_0241 (TepRe1_0241) Accession : YP_004459756.1 Strain : Tepidanaerobacter acetatoxydans Re1 Genome accession: NC_015519 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 258657 - 259934 bp Length : 1278 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase, class IIa; KEGG: toc:Toce_0176 seryl-tRNA synthetase DNA sequence : ATGCTTGATGTAAAGTTTGTAAGACAAAATCCGGATATAGTTAGGAGGTCGCTTCAGAATCGAAGAACTGAAGCGGACCT GGACAGATTTTTGAAACTTGATGAAGAACGCCGAAATCTTCTGTTTGAAGTGGAAAAGTTAAAGAACCTGAGAAACTCAG AATCGGAAGAAATTGCACGTAAAAAGAAAGCCAAAGAGCCTGCTGATGAGCTCATCGCTCGCATGAAAGAGGTATCCCAG CAGATTAAAGAAATGGATGAGAAGATAAATGAGGTAGAAAATAGTCTTGAAGAAATTCTGCTGACAATACCAAATATACC GGATGATTCAGTGCCTATAGGAGAAAGTGATGCGGATAATGTCGAAGTTAGAAGATGGGGTGAGCCGACTAAATTTGATT TTGAGCCTAAACCTCATTGGGACATCGGTGAAGATTTGGATATTTTAGACTTTGAGCGTGCAAGGAAAATTACCGGCTCA AGGTTTACTGTTTACAAGGGAGCGGGTGCTAGGCTTGAAAGAGCACTAATTAATTTTATGCTTGACTTGCATACACAAAA GCATAATTACAAGGAAATATTCCCGCCATTCATAGTAAATCGTGACAGCATGACCGGTACCGGCCAATTGCCAAAATTCG AGGAGGACGCTTTTAAGCTTGCTAACAATAATGATTATTTCTTAATACCTACTGCCGAAGTGCCTGTGACTAATTTGCAC AGAGATGAAATCCTGTCGAAGGATGATTTGCCTATCTACTATGTTGCTTACAGCGGATGTTTTAGAGCCGAAGCGGGTTC GGCGGGAAGAGATACTCGAGGCCTTATAAGGCAGCACCAATTTAATAAAGTGGAACTGGTAAAGTTTACAGATGCGCAAA GCTCAATGCAAGAACTGGAGAAGCTGACAGCCGATGCTGAAGAGGTTCTCAAACTTTTAGGCCTGCCTTATCGCGTAGTA GTTTTAAGCACGGGAGATTTAGGATTTTCCTCCGCAAAAACCTACGACATAGAAGTTTGGATGCCAAGCTATAATCGCTA TGTAGAAATATCCTCCTGCAGTAACTTTAAAGATTTTCAGGCTCGGCGTGCACGAATCCAGTACCGACCGGAAAAGGGAG CAAAACCCGTTTATGTGCACACATTAAATGGTTCGGGTCTTGCAATAGGAAGGACTACGGCAGCCATACTTGAAAACTAT CAGCAATCTGACGGCTCTGTAATAATTCCTGAAGTTTTGCGTGAATACATGGGAAGAACAAATAAAATAGAGATATGA Protein sequence : MLDVKFVRQNPDIVRRSLQNRRTEADLDRFLKLDEERRNLLFEVEKLKNLRNSESEEIARKKKAKEPADELIARMKEVSQ QIKEMDEKINEVENSLEEILLTIPNIPDDSVPIGESDADNVEVRRWGEPTKFDFEPKPHWDIGEDLDILDFERARKITGS RFTVYKGAGARLERALINFMLDLHTQKHNYKEIFPPFIVNRDSMTGTGQLPKFEEDAFKLANNNDYFLIPTAEVPVTNLH RDEILSKDDLPIYYVAYSGCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTDAQSSMQELEKLTADAEEVLKLLGLPYRVV VLSTGDLGFSSAKTYDIEVWMPSYNRYVEISSCSNFKDFQARRARIQYRPEKGAKPVYVHTLNGSGLAIGRTTAAILENY QQSDGSVIIPEVLREYMGRTNKIEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-118 | 61 |
