Gene Information

Name : TepRe1_2180 (TepRe1_2180)
Accession : YP_004461609.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2278147 - 2280588 bp
Length : 2442 bp
Strand : -
Note : KEGG: toc:Toce_2123 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAACGGAAGATTTACTGAACGAGCTCAAAAAGTAATTGCCTATGCACAGGAAGAAGCTAGACGTCTTAATCATAACGT
AGTGGGCACTGAGCATTTACTTTTGGGTCTGTTAAGAGAAGGTGAAGGAGTTGCTGCCAGGGCTTTGATTAATCTTGGTG
TAGATGCAGATAAAGTAAGAAGTCAGGTAGAGATGATGATAGGAGTAGGGCCCTTTCCGATACAGGGACCTATCGGTTAT
ACACCCAGAGCAAAGAGAGTAATGGAGCTTGCTATAGATGAATCCAGGAGATTAGGTCATAACTATGTAGGTACTGAACA
TATCTTACTTGGTCTTATTCGAGAAGGTGAAGGAGTTGCGGCACAGGTATTGGCTAATTTGGGCGTAAGCTTGGATAAAG
CTCGTGAAGAAGTTTTGAACCTGTTAGTGGATTCAAAGGCCCAAGGAAGTTATAAGAAATCAGCCAATACTCCAACACTC
AATCAGTTTGGCAGAGACCTTACAGAACTGGCTGCTGAGGGTAAGCTTGATCCGGTGGTGGGACGCGAGAAGGAAATCGA
ACGGGTGATACAAGTTCTTACCCGCCGCACTAAGAACAACCCCTGTCTTATAGGCGAGCCGGGTGTAGGAAAAACTGCTG
TGGTGGAAGGGCTTGCACAACAGATTATCGAACAAAATGTACCTGAGATTTTAAAGGATAAAAGAGTAGTAAGTCTTGAT
ATGGCATCATTGGTTGCCGGAACTAAATTTCGCGGTGAGTTTGAAGAGCGCCTCAAAAAAGTAATGACAGAAATAAAGCA
AGCGGGGAATGTCATACTTTTTATTGATGAGATGCATACGATTATAGGGGCCGGTGCTGCCGAAGGAGCTATCGATGCTT
CAAATATACTCAAACCGGCTCTGGCTCGAGGCGAAATTCAAACAATTGGCGCCACAACTATCGACGAATATAGAAAATAT
GTGGAGAAGGACCCGGCACTGGAGCGTCGTTTTCAACCCATTATGGTGGAGGAACCGACAGTGGAAGAAACCATACAGAT
ACTAAAAGGCTTGAGAGATAGATATGAGGCACATCATCGTGTTAAAATCTCCGATGAAGCGATTGAAGCTGCTGCAAAAC
TTTCTTACAGATATATTACCGACAGGTTTTTACCTGACAAAGCCATTGACTTGATTGACGAGGCAGCTTCTCGAGTGCGC
TTAAAGACACTTACGGCTCCACCTGAGCTTCGCGAGATGGAAGATAAACTAGAAGCTATCCGAAAGGAAAAAGATGCGGC
CATAAGAGCACAAGAGTTTGAAAAAGCAGCAAGCCTTAGAGATAAGGAACAAGAAGTCAAGGCAGAGGTGGAAAAATTAA
AAGAGTTATGGCAAAAAGACTATAAATTTGAGAACTCTACTGTAAAAGAGGAAGATATTGCACATATTGTTGCAATTTGG
ACGGGAATACCTGTTAAACGCTTAACGGAAGAAGAGTCAGAGCGTCTGCTGAAATTGGAAGAAGTTTTGCATAATAGAGT
CATAGGTCAGGACGAAGCTGTAAAGGCTGTTGCAAAAGCTATACGGAGGGCTTATGCCGGCCTTAAAGACCCTGCAAGAC
CTATAGGTTCGTTTATATTCTTAGGACCTACGGGAGTAGGCAAGACAGAATTGGCAAGGGCTTTAGCCGATGCAATGTTT
GGCGATGAAGATGCCATGATCAGGCTGGATATGTCTGAATACATGGAGAAATTTGCTGTATCTCGAATTGTCGGCGCTCC
TCCGGGATATGTGGGATATGAAGAGGGCGGCGAACTAACTGAAAAAGTTCGGCGCAGACCTTATTCGGTTATACTTTTTG
ACGAAATAGAAAAGGCTCATCCGGATGTTTTCAACATTCTTTTGCAAATTCTTGAGGACGGCAGGTTAACTGACGCAAAA
GGTCGAACTGTAGATTTTAGAAATACTATACTCATCATGACTTCTAATGTTGGTGCAAATCTTATACAAAAACCGAAGGT
ATTAGGTTTTGCTCCGGTGCAGGAAGAAGAAAAGAGCTATGCTGAAATGAAGGATATGGTTTTAAATGAACTTAAGAGAA
CATTTAAGCCTGAATTTCTAAACCGCATAGATGAGATTATAGTTTTCCATCCTCTCAGTGAGGAACATATTCGAGAAATA
GTTACTCTTATGATTGATGAGGTTAACAGAAGACTTACCGAAAAGCAAATTTCCATTGAGGTTACTGACAAGGCTAAAGA
TGTGTTGGCCAAAGAGGGTTATGATCCCATGTATGGCGCAAGGCCGCTTCGCCGTGTAATTCAAAAGAGAATTGAAGACA
GACTTTCTGAAGAAATGTTAAAAGGCAGTATTACAGATGGTGATGTGGTATTAGTTGATGTTGACGAGGATGAGAAAGAG
TTCACATTTAAGAAAAAAGAGCTTACAACAACTAAATTTTAA

Protein sequence :
MNGRFTERAQKVIAYAQEEARRLNHNVVGTEHLLLGLLREGEGVAARALINLGVDADKVRSQVEMMIGVGPFPIQGPIGY
TPRAKRVMELAIDESRRLGHNYVGTEHILLGLIREGEGVAAQVLANLGVSLDKAREEVLNLLVDSKAQGSYKKSANTPTL
NQFGRDLTELAAEGKLDPVVGREKEIERVIQVLTRRTKNNPCLIGEPGVGKTAVVEGLAQQIIEQNVPEILKDKRVVSLD
MASLVAGTKFRGEFEERLKKVMTEIKQAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQTIGATTIDEYRKY
VEKDPALERRFQPIMVEEPTVEETIQILKGLRDRYEAHHRVKISDEAIEAAAKLSYRYITDRFLPDKAIDLIDEAASRVR
LKTLTAPPELREMEDKLEAIRKEKDAAIRAQEFEKAASLRDKEQEVKAEVEKLKELWQKDYKFENSTVKEEDIAHIVAIW
TGIPVKRLTEEESERLLKLEEVLHNRVIGQDEAVKAVAKAIRRAYAGLKDPARPIGSFIFLGPTGVGKTELARALADAMF
GDEDAMIRLDMSEYMEKFAVSRIVGAPPGYVGYEEGGELTEKVRRRPYSVILFDEIEKAHPDVFNILLQILEDGRLTDAK
GRTVDFRNTILIMTSNVGANLIQKPKVLGFAPVQEEEKSYAEMKDMVLNELKRTFKPEFLNRIDEIIVFHPLSEEHIREI
VTLMIDEVNRRLTEKQISIEVTDKAKDVLAKEGYDPMYGARPLRRVIQKRIEDRLSEEMLKGSITDGDVVLVDVDEDEKE
FTFKKKELTTTKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-83 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TepRe1_2180 YP_004461609.1 ATPase AAA VFG0079 Protein 0.0 67
TepRe1_2180 YP_004461609.1 ATPase AAA VFG0080 Protein 7e-133 52