Gene Information

Name : TepRe1_1923 (TepRe1_1923)
Accession : YP_004461359.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1993082 - 1994263 bp
Length : 1182 bp
Strand : -
Note : PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: tmt:Tmath_1425 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
TTGGGTAAAGACTATGGCTTTGATACCCTTTCAATACATGGAGGAGCAGAGAAAAACCACCCTAAAAATGCTTTAAACCC
CCCGATATTTATGACTTCTACATATGTTTTTGATGATGTAAAAGATGCTGAAGATATCATGAACTTTGAAAAGCAAGGTT
TTATATATACCCGCGGCAATAATCCCACATTACAGCTTTTTGAGAAAAGAATGGCTGCTTTGGAAGAGGGTGAGGATGCT
GTTGCATTCGCATCGGGGATGGCAGCCATATCCTCGGTTTTGTTTTCTTTGCTTTCACCGAAAGATAATGTGGTAGTACA
CAAGACACTGTACGGTTCCAGCTTTACTGTAACACATAAGCTCCTTCCCAAATATCACATAGATTGCAAAAGCGTAGATT
TTACTGAACCAAAGGCAGTTGAAGGGGCTATAGATAAAAATACAAAGGTTTTGTATTTTGAAACACCGGCAAATCCGAAT
CTTGCCATCATCGACATACAGCAGATAGTAAGGATAGCAAAGACTTATGGTGTTAAGGTTGTTGTGGATAATACCTTTGC
CACGCCTTATTTCCAAAGGCCTCTTGCTTTCGGCGCCGATGTGGTAGTTCACAGTGCAACCAAGTACATTTGCGGTCACG
GCGATGCCCTTGGCGGTGTTGCGGTATCGAAGGATGCCGATTACATAAAAAAACTGAAGTTTGACTACATGTGCGAATTC
GGCGGTGTTATGAGTCCTTTTAATGCTTGGCTGATGCTCAGGGGTTTAAAAACATTAGGCTTAAGGATGCGCCAGCATGA
GGCCAATGCTATGGCGATTGCAGAGTTTTTGAAAAGTCACGATAGCATTGAAGAAGTTTTTTATCCGGGACTTGCCGACT
TTAGAGGCCACGAGCTTGCAAAAAGGCAAATGGACGGGTTCGGCGCTGTGATGAGCTTTGAAGTTAAAGGCGGCTTGAAA
GCGGCAAAACGATTTATAAACAGTGTAAAGCTTGCTAAAATTGCAGTAAGTTTGGGCGACTGTGAAACATTGATAGAACT
TCCGGCAGCTATGACCCATGCCGGATATCCGAAAGCAAGGCTGCAGGAATTCGACCTTACAGATAGTATTGTTAGATTAT
CTGTTGGGATTGAAAATGTTAAGGATATTATCGAAGATTTGGACAATGCCTTAAAAGTCTGA

Protein sequence : 
MGKDYGFDTLSIHGGAEKNHPKNALNPPIFMTSTYVFDDVKDAEDIMNFEKQGFIYTRGNNPTLQLFEKRMAALEEGEDA
VAFASGMAAISSVLFSLLSPKDNVVVHKTLYGSSFTVTHKLLPKYHIDCKSVDFTEPKAVEGAIDKNTKVLYFETPANPN
LAIIDIQQIVRIAKTYGVKVVVDNTFATPYFQRPLAFGADVVVHSATKYICGHGDALGGVAVSKDADYIKKLKFDYMCEF
GGVMSPFNAWLMLRGLKTLGLRMRQHEANAMAIAEFLKSHDSIEEVFYPGLADFRGHELAKRQMDGFGAVMSFEVKGGLK
AAKRFINSVKLAKIAVSLGDCETLIELPAAMTHAGYPKARLQEFDLTDSIVRLSVGIENVKDIIEDLDNALKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-55 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TepRe1_1923 YP_004461359.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 8e-81 45