Gene Information

Name : TepRe1_1851 (TepRe1_1851)
Accession : YP_004461288.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1913578 - 1914663 bp
Length : 1086 bp
Strand : -
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: toc:Toce_1695 diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctional deaminase-

DNA sequence :
ATGGAAACTGATGAGTATTTTATGCAAAGGGCATTGGAGCTTGCAGAAAAGGGCAGAAAAACAACGGGAGAAAATCCCAT
GGTAGGGGCAGTTATCGTAAAAGACGGCAAAATTGTAGGGGAAGGCTATCATAAAAAGGCAGGGGGACCTCATGCCGAAA
TAGAGGCTCTAAAGGAAGCCGGACTTAATGCAAAAGGAGCAACTATTTATGTAAATCTGGAACCTTGCTGTCACTACGGG
AAAACGCCGCCTTGCACTGAAGCACTGATAAAAGCCCAAATAGCAAGAGTAGTTGCAGCCATAGAAGATCCCAATTCCAA
AGTTGCCGGAAAAGGGTTTTCGCAATTGCAAAATGCCGGGATAGAAGTTTCGGTAGGCGTTCTAAAGAATAAAGCATCAA
AGTTAAATGAAGTTTTTATTAAAAACATTTCCGAGCAAACCCCCTTTGTCATAGCAAAAATAGCTCAGAGCGTTGATGGA
AAGATTGCCTTATCTTCCGGAAAATCAAAATGGATAACATGTGATGCTGCTAGAAAAAAGGGTCACGAGATAAGAAGCAT
GTATGATGCTATTTTAGTGGGTATAGGAACAGTTCTGGCGGATGACCCGATCCTTGACTGCCGTCTGGCAAATAACGCAG
CAAATCCGGTAAAGATAGTCCTAGATTCATCGGCCGTAATTCCCATCGAGTCAAAACTCTTGCAAGGCAAAGGTAAAGTT
ATTTTAGCCACTACAGCGCAGGCTGACAAAGGGCGCTTGCAAAAGCTTGAGGAGATGGGTGCAGATATTATAATGACATC
TCAGAATAAAGTAAACCTTAATGAACTATTGAAGGCTCTCTATAATAGTGGAATTTACAGTATTTTAGTGGAAGGAGGCG
CCAAGGTATTTACTTCATTTCTTATAGAAGGGCTTTTAGATAAATTAATAGTTTTCCTTTCTCCAAAGATTATCGGAGGT
GATGGCAAGGATTATGTGGAAAATCTTTTTCTAAGAGAAATGAAAGATGTGTATGATTTTTATATTGACGATGCAGAAAA
AGTCGGCGAAGATATCATGCTTACAATGTATTCTAAAAAAGGATGA

Protein sequence :
METDEYFMQRALELAEKGRKTTGENPMVGAVIVKDGKIVGEGYHKKAGGPHAEIEALKEAGLNAKGATIYVNLEPCCHYG
KTPPCTEALIKAQIARVVAAIEDPNSKVAGKGFSQLQNAGIEVSVGVLKNKASKLNEVFIKNISEQTPFVIAKIAQSVDG
KIALSSGKSKWITCDAARKKGHEIRSMYDAILVGIGTVLADDPILDCRLANNAANPVKIVLDSSAVIPIESKLLQGKGKV
ILATTAQADKGRLQKLEEMGADIIMTSQNKVNLNELLKALYNSGIYSILVEGGAKVFTSFLIEGLLDKLIVFLSPKIIGG
DGKDYVENLFLREMKDVYDFYIDDAEKVGEDIMLTMYSKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-55 44
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-55 44