|
Name : TepRe1_1757 (TepRe1_1757) Accession : YP_004461195.1 Strain : Tepidanaerobacter acetatoxydans Re1 Genome accession: NC_015519 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1812476 - 1814320 bp Length : 1845 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: cth:Cthe_2334 polysaccharide biosynthesis protein CapD DNA sequence : GTGTTTAAGGAAGGGATTTTTAAGGTGAAGACCACACTGCGTAAAGTCTTAATGGTAATTTCGGATATTTTGATTATAAA TATTTCGCTGTATTTATCGCTTATCCTGCGATTTGAAAGTGATATTCCAAATGAGTATTTAACACTTTTTGAACAAACTC ATATTATAGTGACTGTTATTGCACTTTGCAGCTTCTTGGTTTTTAATTTATATAATAGAATCTGGAAATATGCCAGTATA AGTGAGCTTATTTCGATAGTTGTGGCAACTTCTTTTAGCACTCTTACATTTTTAGGATATACATTCATGGTTAGAAAAAC CTTTCCCCGCAGCATATACATATTGTTTTGGCTTTTACTTACTACATTTGTTGGAGGAAGCAGATTTATTTTAAGAACTT TTAATGGTGTAACTCCGACTTTTAGGAAAACAGAAGGTGTCCGAAATGCTATGGTTATCGGAGCGGGTGAAGCGGGATCT ATGGTTATTCAAGAGTTTAAGAAGCATCCGGATCTAAGGATGAAGCCTGTTGCTATTATTGATGATGATACAAATAAGCA CGGTATGAGCATTCATGGGGTAAAGGTTTTAGGTGCACGTCAGGTAATTCCTGAAACAGTCTTGCGAAAAAATATTAAAG AGATAATAATAGCTATGCCGTCTATTGATAGGCATCAGATAAGAGATATAGTGGATATCTGCAGCAAAACCAAGTGCAAA TTAAGGATTGTGCCGGGGGTATATGAACTGCTTGATGGGAAGGTAAGTATAAAAAGGCTTCGTGATGTGAGGATAGAGGA CCTTTTGGGCAGGGAGCCGGTTAAGTTAAATCTGGATGAAATCTCCGGTTATATAGAAAATAAGGTGGTGCTGGTAACCG GCGGCGGTGGGTCCATAGGTTCGGAGCTGTGTCGGCAGATAGCCAGGTTTAAACCTAAAGAGCTTTTGATTTTTGATATC AGCGAAAACAATGTCTACAGTTTAGAGTATGATTTAAAAACTCTTTTTCCCGACTTATGCTATACTCCGCTGATTGGCAG TGTAAGGGATAAGGGCCGACTGGAATATGTATTTAAAAAATACGGGCCAGATGTGGTTTTTCATGCTGCGGCACACAAGC ACGTGCCGATGATGGAGTTAAATGCTACTGAGGCCATAAAAAATAATGTTTTTGGAACGCTAAATGTGGCAGAAGCGGCG GATAAGTATGGTGCGGAAAGGTTTACCCTTATATCTACAGACAAGGCAGTAAATCCTACTAATATTATGGGTGCGTCAAA GCGGATTGCGGAGATTGTTGTACAGATGATGTCTATGAAAAGCAGTACTGTGTTTTCAGCTGTAAGGTTTGGGAATGTTT TGGGAAGTGAGGGGAGTGTGATTCCCCTTTTCAGAAAGCAGATAGAAAACGGAGGGCCTGTAACGGTAACTCATCCTGAA GTCATCCGATATTTTATGACTATTCCGGAAGCCGTGCAGCTTGTAATACAGGCGGGAGCCCTTGCGAAGGGCGGAGAAAT ATTTATCTTGGATATGGGGGAGCCGGTAAAAATCGCAGACCTTGCCCGAGACATGATAAAGCTATCAGGGCTGGAGCCGG GTGTGGATATAGATATAGAATACATAGGCCTGAGGCCGGGTGAAAAACTTTTTGAAGAGCTGCTGCTAAACGAAGAAGGC ATAACTGCCACCAAATACAAGAAGATATACATCGCAAAACCGACATTCAGTAATGTTGATGCATTTGAAAAAGAGATTTT AAACCTGAGGGAGCTGCTCTTTGACGCCAACGCAGAAATAAGGGATGTAATAAAGAAAATAGTCCCGACATATAAATGCA GATGA Protein sequence : MFKEGIFKVKTTLRKVLMVISDILIINISLYLSLILRFESDIPNEYLTLFEQTHIIVTVIALCSFLVFNLYNRIWKYASI SELISIVVATSFSTLTFLGYTFMVRKTFPRSIYILFWLLLTTFVGGSRFILRTFNGVTPTFRKTEGVRNAMVIGAGEAGS MVIQEFKKHPDLRMKPVAIIDDDTNKHGMSIHGVKVLGARQVIPETVLRKNIKEIIIAMPSIDRHQIRDIVDICSKTKCK LRIVPGVYELLDGKVSIKRLRDVRIEDLLGREPVKLNLDEISGYIENKVVLVTGGGGSIGSELCRQIARFKPKELLIFDI SENNVYSLEYDLKTLFPDLCYTPLIGSVRDKGRLEYVFKKYGPDVVFHAAAHKHVPMMELNATEAIKNNVFGTLNVAEAA DKYGAERFTLISTDKAVNPTNIMGASKRIAEIVVQMMSMKSSTVFSAVRFGNVLGSEGSVIPLFRKQIENGGPVTVTHPE VIRYFMTIPEAVQLVIQAGALAKGGEIFILDMGEPVKIADLARDMIKLSGLEPGVDIDIEYIGLRPGEKLFEELLLNEEG ITATKYKKIYIAKPTFSNVDAFEKEILNLRELLFDANAEIRDVIKKIVPTYKCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-103 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-100 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TepRe1_1757 | YP_004461195.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-99 | 46 |
| TepRe1_1757 | YP_004461195.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-86 | 45 |
