Gene Information

Name : TepRe1_1419 (TepRe1_1419)
Accession : YP_004460872.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1450912 - 1452567 bp
Length : 1656 bp
Strand : -
Note : KEGG: toc:Toce_1336 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGATAGGAAAAATCTGGAAGATTACTTATTAGAAGAGAACTACATGACAGAAACGGATCTGAAAAGGGTTAAAGAAAT
ACAGATTGCAAGTGATAAAAAATTATATGAGATAATTATTGATGAAGGTTTTATTTCCGAGGGAGAATTGACAGAAATAT
TAGCTCTTAGTACGGGTTTCCCGCGCGTTAACTTAAGTAAACTATATATTAATCCCAATGTAATTAATTTAGTGCCGGAG
TATCTGGCGAGAAAACATATAGTTCTGCCAATAAAAAAGGATGGCAATTCATTGATATTAGCAATAAGTAACCCTTATGA
TATTTTTGCTGTTGATGATATTAAGATTGCCAGTGGTTATGATATCCAACTTGTTCTTGCTACAAAAAAGGAAATACAGA
AAGCTATAGAAGCTTATTATAAGCCATATGCAGATATGGTTGTAAACAAAACTAATAATGTAAATGAAGAATTAGAGGAG
GCTGAAAAAGCACCTGTAATAAAACTGGTCGATACTTTAGTGCACCAGGCAGTAAAGAAAAATGCCAGTGATATTCATAT
TGAACCTCAAGAAAAAAATGTTCGTGTTAGATATAGGTTAGATGGTGAGTTAACACAAATAATGCTTTTTGATAAGGCAT
TACTTCAAGCGGTTATAGCACGTATCAAAGTAATGGCGAATTTAGATATTACTAAAAAGAGAGTTCCTCAGGATGGGAGC
TTTAAACTTACAGTTGAAAATCACATAATAGATATCCGCGTGTCAACGATTCCTACCATTAATGGTGAAAAGGCTGTGCT
GCGGGTATTAAACCGTGATAGGTTTTTGCTTAGCATAGATCAGCTGGGATTTAATAAAAAACAAAAAAGTTGCATATATA
AAATGCTTGAATTACCTTACGGTATGATTCTGGTATGCGGTCCTACCGGTTGTGGCAAAACTACCACGCTTTACTCAATG
ATAAATCATATAAACAAATCTAATAAAAATATTGTAACACTGGAAGATCCAGTCGAATACGCACTTTGCGGCATTAATCA
GATGCAGATTAATCCCAAAAGTGGCATTACTTTTGCTAATGGACTTCGTGCTATTTTGAGGCAAGACCCTAATATTATTA
TGGTTGGGGAAATAAGAGATAGGGAAACTGCTGATATTGCTATTAGAGCAGCGCTTACAGGTCATTTAGTTTTTTCGACT
TTACATACTAATAGTGCATCAGGAGCAATTGCGCGTCTTTTAGACATGGGAGTTGAACCTTATCTTTTGGCTTCATGTCT
GGCAGGAATTATCTCGCAAAGGTTAGTACGAAAAACTTGTATTATGTGCAAGGAAGAATACCTGGCATCAGAAAACGAAA
AAGCCTATATGAATGTGAGGGATGAAAATAAAGGTCTTAGACTTTTTAAAGGCAAAGGGTGCAATTCCTGCAATTTTACA
GGTTATAGCGGTCGCACAGTAGTTGGTGAAGTAATTAATGTTCATTCAGCACACCGTAAATTAATCTCAAGGCAAGCAAA
CTTACAAGAAATCGATAAAGTCTCCCGCACTTTTGGTTATGAACATATAAAAGATAATGCTCTTAAATTGGTTCAAAGTG
GAATTACTACATTTGAAGAAGCACTGCAAGTCATTTTTCAGGAAAGTCTCGAGTAA

Protein sequence :
MDRKNLEDYLLEENYMTETDLKRVKEIQIASDKKLYEIIIDEGFISEGELTEILALSTGFPRVNLSKLYINPNVINLVPE
YLARKHIVLPIKKDGNSLILAISNPYDIFAVDDIKIASGYDIQLVLATKKEIQKAIEAYYKPYADMVVNKTNNVNEELEE
AEKAPVIKLVDTLVHQAVKKNASDIHIEPQEKNVRVRYRLDGELTQIMLFDKALLQAVIARIKVMANLDITKKRVPQDGS
FKLTVENHIIDIRVSTIPTINGEKAVLRVLNRDRFLLSIDQLGFNKKQKSCIYKMLELPYGMILVCGPTGCGKTTTLYSM
INHINKSNKNIVTLEDPVEYALCGINQMQINPKSGITFANGLRAILRQDPNIIMVGEIRDRETADIAIRAALTGHLVFST
LHTNSASGAIARLLDMGVEPYLLASCLAGIISQRLVRKTCIMCKEEYLASENEKAYMNVRDENKGLRLFKGKGCNSCNFT
GYSGRTVVGEVINVHSAHRKLISRQANLQEIDKVSRTFGYEHIKDNALKLVQSGITTFEEALQVIFQESLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-90 44
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-91 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TepRe1_1419 YP_004460872.1 type II secretion system protein E VFG1876 Protein 5e-89 47
TepRe1_1419 YP_004460872.1 type II secretion system protein E VFG0182 Protein 7e-88 47
TepRe1_1419 YP_004460872.1 type II secretion system protein E VFG2048 Protein 1e-90 44
TepRe1_1419 YP_004460872.1 type II secretion system protein E VFG2426 Protein 2e-70 43