Gene Information

Name : TepRe1_1237 (TepRe1_1237)
Accession : YP_004460690.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_015519
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1281994 - 1282770 bp
Length : 777 bp
Strand : +
Note : KEGG: toc:Toce_1113 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
ATGAAAATTAATAAGAATACTGTAATAAAAATGACTTATACAAGTTTATGCTTAATGTGCTACGAGAAAATTGTATACGC
AGCTCCACAAGACATTCCAATACCAGTTCCATCATTCCCTTTTATAAAGCAGGCTGAAACTACCGGTGAAACTGCTATGG
CCTTACAAATAGTTCTACTGCTTACCATATTATCCTTAGCGCCTTCAATACTTACATTGTTGACTTCTTTTACTCGAACA
ATAATCGTGCTTTCATTTGTTAGAAATGGGTTGGGGGTTCAACAAGTTCCGCCTACTCAGGTTTTAATAGGTCTTGCTTT
GTTTATCACTGTATTTGTAATGGCACCTGTTTGGACCGAGATAAATAGTGAAGCTATACAACCATACATGAATCAAGAAA
TTGATACTTCTGAAGCTTTACGGAGGTCTCAGATTCCTTTACGCAACTTTATGTTTAGACAGACAAGGGAAAAAGACTTG
GCTCTTTTTGTACATTATGCAAAACTTGAAACCCCATTAAATACACTTGATGATATACCTACATATGTACTGATTCCCTC
GTTTATAATTAGTGAATTAAAAACTGCTTTTCAAATGGGTTTTATAATATTTATACCTTTTTTAGTGATAGATATGATAG
TATCCAGCACACTTATGTCAATGGGAATGCTGATGCTACCTCCAATAATGATCTCTTTACCTTTTAAGATATTGCTATTT
GTCATGGTAGACGGATGGAATTTAGTTATTAATTCAATTCTTGCAGGGTTTCACTAA

Protein sequence : 
MKINKNTVIKMTYTSLCLMCYEKIVYAAPQDIPIPVPSFPFIKQAETTGETAMALQIVLLLTILSLAPSILTLLTSFTRT
IIVLSFVRNGLGVQQVPPTQVLIGLALFITVFVMAPVWTEINSEAIQPYMNQEIDTSEALRRSQIPLRNFMFRQTREKDL
ALFVHYAKLETPLNTLDDIPTYVLIPSFIISELKTAFQMGFIIFIPFLVIDMIVSSTLMSMGMLMLPPIMISLPFKILLF
VMVDGWNLVINSILAGFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 2e-15 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 2e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TepRe1_1237 YP_004460690.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-42 62
TepRe1_1237 YP_004460690.1 flagellar biosynthetic protein FliP VFG1259 Protein 5e-44 57
TepRe1_1237 YP_004460690.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-39 52
TepRe1_1237 YP_004460690.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-37 51