Gene Information

Name : MPTP_0874 (MPTP_0874)
Accession : YP_004456145.1
Strain : Melissococcus plutonius ATCC 35311
Genome accession: NC_015516
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 918773 - 921379 bp
Length : 2607 bp
Strand : +
Note : GO:0005515; GO:0005524; GO:0019538

DNA sequence :
ATGAATATTGAAAAAATGACAACAGCATTACAAGAATCATTTTCTGAAGCGCAACAAATTGCAAATGTCCGTCATCACCA
AGAAATCGACATTGCACATTTGTGGAAAGTTTTTTTACAACCCAATCATTTTGGGCGAAATTTCTATGTGGATAGTGGCA
TAGATATGGATGCCTTTGAACAAGAAGTTGACAAAGTTCTAAATACCTATTCGAGTGTTGAAGGTAAAAATATTCAATAT
GGTCAAGTAATAAGTCAAAATTTATTTCGTTTACTAAATGAAGCAAATCAGTTAGCGATTGCTTTTCAAGACGATTATCT
ATCAACTGAAATCATGCTGCTTGCATTAATGCATTTAAAAGAGTATTCATTAACGAAATATTTATTACATAGTGGTATTA
ATGAAAAAACAATCAAACAAACAATTGAATCAATGAGAGGAGGAGAACGTGTGACTTCCCAAAATCAAGAAGAACAATAT
AAAGCTTTGGAAAAGTATGGAGTTGATTTAATCCAACAAATCAAAACTGGAAAACAAGATCCAATTATTGGTAGAGACGA
AGAAATACGGGATACTATTCGGATTTTATCTCGTAAAACAAAAAACAATCCCGTTTTAATTGGCGAACCGGGTGTTGGAA
AAACAGCTATTGTTGAGGGATTGGCTCAACGAATTGTCCGAAAAGATGTTCCTGATAATTTAAAAGATAAAACGATTTTT
TCTTTAGATATGGGAGCATTGCTTGCTGGTGCTAAGTATCGAGGTGAATTTGAAGAACGTTTGAAGTCTGTTCTTAAAGA
AGTTAAAAAAAGTGAAGGTCAAATTATTTTATTTATCGATGAAATTCATACGATTGTTGGTGCTGGAAAAACAGAGGGTA
GTATGGATGCTGGAAATTTATTAAAACCGATGTTAGCACGGGGAGAGCTTCATTTAATTGGTGCAACAACCCTAGATGAG
TATCGTCAATATATGGAAAAAGACAAAGCGTTAGAACGACGTTTCCAACGTGTATTGATCAAAGAACCTACAGTTGAGGA
TACAATTAGCATTTTACGTGGATTAAAAGAGCGGTTTGAAATTCATCATGGTGTAAATATTCATGATAATGCTTTGGTGG
CTGCAGTTAGTTTATCAAATCGTTATATTACGGATCGTTTCTTGCCTGATAAAGCCATTGATTTAGTCGATGAAGCTTGT
GCAACGATTCGAGTAGAGATGAATTCAATGCCTACAGAATTGGATCAGATAACCAGACGTTTAATTCAATTAGAAATTGA
AGAAGCAGCATTAAAGAAAGAGTCCGATTCTGCTAGTCAAAAACGTTTGGCTGTTTTACGGGCTGAATTAGCAGAACTAC
GTGAAGAGGCAAATACATTAAAAATGCAGTGGGAAACAGAGAAAGAAGAAATAAACAGTGTTAGTAGTAAACGAGCTGAA
ATTGAAAAAGCAAAGCACGCATTGGAAGAAGCAGAAAATAACTATGATTTAGAACAGGCAGCTGTTTTGCGCCATGGAAC
AATCCCTCAACTAGATAAAGAATTAAAAATACTTGAAGAAAAAAATCAAACGAATACTGCAAAATTGGTTCAGGAATCTG
TCACAGAAAACGAAATTGCTCAGGTAATTGGCCGATTAACTGGCATTCCAATCACCAAACTTGTTGAAGGAGAACGAGAA
AAATTAATCAAATTAAATGAAACACTTCATCAAAGCGTTATGGGACAAAATGAAGCAGTCGATGCTTTAAGTGATGCCGT
CATTCGTGCACGTGCTGGGTTACAAGATCCAAATCGTCCGCTAGGATCTTTCTTGTTCTTAGGACCGACTGGTGTTGGAA
AAACAGAATTAGCAAAAGCTTTAGCAGAAAACTTATTTGATTCTGAAGAACATATGGTACGAATTGACATGAGTGAATAT
ATGGAAAAACATCATGTGTCTCGTTTGGTAGGTGCTCCTCCTGGTTATGTAGGTTATGAAGAAGGAGGTCAATTGACAGA
GGCAGTCAGACGTAATCCCTATACAATTATCCTATTTGATGAAATAGAAAAAGCTCATTCAGATGTCTTTAATTTACTCC
TACAGGTTCTTGATGATGGTCGCTTAACAGATTCAATGGGACGAATCGTTGATTTCAAGAATACTGTTTTGATCATGACA
AGCAATATTGGCTCTCAATTCTTGCTTGAGGGAGTTACCTCTGATGGAAAGATTTCTGATCATGCAAAAGAACAAGTGTT
AGCTCTATTGAAAGGTCAATTTAAGCCTGAATTTTTAAATAGAATTGATGATACCATTTTATTTACGCCTTTAAGTTTAG
CAGATGTTAAACAAATTATTGATAAAATGATTGAACAACTAGCAAAAAGACTTGAACAACAAGAAATTTTCCTAGATATT
TCTCTTGATGCTAAAACTTGGATTGCGGAGAAAGGCTATGATCCTATTTATGGTGCCCGACCATTACGACGATTCATTAC
AAAAGAGATAGAAACACCTTTAGCAAAAGAAATCATTTCAGGGAGTGTATTACCAAAAACGAAAGTAACAATTGCTTTGT
TAAACAATCAGTTGGTATTTCAAAATGTACCAATAAAAGAAGAATAA

Protein sequence :
MNIEKMTTALQESFSEAQQIANVRHHQEIDIAHLWKVFLQPNHFGRNFYVDSGIDMDAFEQEVDKVLNTYSSVEGKNIQY
GQVISQNLFRLLNEANQLAIAFQDDYLSTEIMLLALMHLKEYSLTKYLLHSGINEKTIKQTIESMRGGERVTSQNQEEQY
KALEKYGVDLIQQIKTGKQDPIIGRDEEIRDTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPDNLKDKTIF
SLDMGALLAGAKYRGEFEERLKSVLKEVKKSEGQIILFIDEIHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDE
YRQYMEKDKALERRFQRVLIKEPTVEDTISILRGLKERFEIHHGVNIHDNALVAAVSLSNRYITDRFLPDKAIDLVDEAC
ATIRVEMNSMPTELDQITRRLIQLEIEEAALKKESDSASQKRLAVLRAELAELREEANTLKMQWETEKEEINSVSSKRAE
IEKAKHALEEAENNYDLEQAAVLRHGTIPQLDKELKILEEKNQTNTAKLVQESVTENEIAQVIGRLTGIPITKLVEGERE
KLIKLNETLHQSVMGQNEAVDALSDAVIRARAGLQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEY
MEKHHVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIILFDEIEKAHSDVFNLLLQVLDDGRLTDSMGRIVDFKNTVLIMT
SNIGSQFLLEGVTSDGKISDHAKEQVLALLKGQFKPEFLNRIDDTILFTPLSLADVKQIIDKMIEQLAKRLEQQEIFLDI
SLDAKTWIAEKGYDPIYGARPLRRFITKEIETPLAKEIISGSVLPKTKVTIALLNNQLVFQNVPIKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPTP_0874 YP_004456145.1 ClpB protein VFG0079 Protein 3e-168 47
MPTP_0874 YP_004456145.1 ClpB protein VFG0080 Protein 9e-128 44
MPTP_0874 YP_004456145.1 ClpB protein VFG2076 Protein 3e-113 44
MPTP_0874 YP_004456145.1 ClpB protein VFG2084 Protein 4e-107 41