Gene Information

Name : MPTP_1336 (MPTP_1336)
Accession : YP_004456575.1
Strain : Melissococcus plutonius ATCC 35311
Genome accession: NC_015516
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1411957 - 1412643 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAATATTCTAATTATTGAGGATGAAAAAAATTTAGCTCGCTTTGTTGAATTAGAATTGGAACACGAAGGATATAC
TGCTGAAGTTCATTATAACGGACGTACAGGGCTAGAAGCAGCTTTGAATAATAACTGGAATGCGATTCTTCTAGATTTAA
TGTTACCAGAGTTGAATGGACTGGAAGTCTGTCGTCGAATTCGCCAAGTAAAAAATACACCGATTATTATGATGACAGCA
AGAGATTCGGTTATCGATCGTGTTTCTGGACTGGATCATGGAGCAGATGACTATATTGTAAAACCCTTTGCTATTGAAGA
GTTACTGGCACGTCTTAGAGCTTTATTACGTCGAATTGATATTGAAGGCAATAAGAATATTACCAAACAAACGACAATCA
CTTACCGTGATTTAACAATTGAAAAAGAAAATCGAATTGTTCGTAGGGAATCTGAAATAATTGAATTAACAAAACGTGAA
TATGAATTATTACTAGCATTAATGAAAAATGTCAACGTTGTTTTAGCACGTGATGTTTTGTTAAATAAAGTATGGGGATA
TGAAACAGAGGTCGAAACAAATGTTGTTGATGTTTATATCCGTTATTTAAGAAATAAAATTGATCTTCCTAGAGAAGAAA
GTTATATTCAAACAGTGCGTGGAACAGGTTATGTGATGCGCTCTTGA

Protein sequence :
MSNILIIEDEKNLARFVELELEHEGYTAEVHYNGRTGLEAALNNNWNAILLDLMLPELNGLEVCRRIRQVKNTPIIMMTA
RDSVIDRVSGLDHGADDYIVKPFAIEELLARLRALLRRIDIEGNKNITKQTTITYRDLTIEKENRIVRRESEIIELTKRE
YELLLALMKNVNVVLARDVLLNKVWGYETEVETNVVDVYIRYLRNKIDLPREESYIQTVRGTGYVMRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-25 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator HE999704.1.gene1528. Protein 1e-68 78
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_007622.3794948.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_003923.1003417.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_013450.8614146.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_002951.3238224.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_007793.3914065.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_002758.1121390.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_010079.5776364.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_002952.2859858.p0 Protein 4e-42 55
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator AE015929.1.gene1106. Protein 2e-38 53
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator BAC0125 Protein 2e-25 42
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator BAC0308 Protein 1e-25 41
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator NC_012469.1.7685629. Protein 1e-31 41
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator HE999704.1.gene2815. Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator VFG1389 Protein 8e-27 44
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator VFG1390 Protein 5e-31 42
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator VFG0596 Protein 2e-25 41
MPTP_1336 YP_004456575.1 DNA-binding heavy metal response regulator VFG1702 Protein 2e-25 41