Gene Information

Name : Celf_0690 (Celf_0690)
Accession : YP_004452217.1
Strain : Cellulomonas fimi ATCC 484
Genome accession: NC_015514
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 757639 - 758361 bp
Length : 723 bp
Strand : +
Note : KEGG: flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence : 
ATGATCCACGCCCCGACCCCGCCGACGGCGCCGCTCGCCCCGGCCCTCGGCGACACCGTCACGGTCGCCGTCAACGGCGT
CAACGGCACGCCGAGCAGCTCGATCGTCGTGCTCCTCGCGATCACGCTGCTGTCCGTCGCACCCGCGCTCATCCTGATGA
CGACGAGCTTCACGAAGATCTTCGTCGTCCTGTCGTTCACCCGGAACGCGCTCGGCCTGCAGGGCGTGCCGCCCAACCAG
GTGCTCGCGGGCCTCGCGCTGTTCCTCAGCCTGTTCGTCATGGCCCCGGTCGTCAGCGACATCAACAGCGTCGGCGTGCA
GCCCTACCTCGACGGCTCCCTGACGTTCTCGCAGGCCGTCGACGTGGGCTCAGGCCCGCTGCGCGAGTTCATGCTCGGTC
AGACGCGCGAGCAGGACCTGGCGCTGCTGACCCGCGCCGCCGACCAGGAGAACCCGGCGTCCCCCGAGGACGTGCCGTTC
GCGACGCTCGTGCCCGCGTTCCTGCTGTCCGAGCTGCGGTCCGCGTTCATCATGGGCTTCGTCATCTTCGTGCCGTTCCT
CGTCATCGACCTCGTCGTCTCGGCGTCCCTGATGTCGATGGGCATGATGATGCTGCCGCCGGTGATGATCTCCCTGCCGT
TCAAGATCCTGCTGTTCGTCCTCGTCGACGGCTGGGGGCTCGTCGTCACGTCGCTCGTCGGCTCCTACACGGGCAGCGGG
TAG

Protein sequence : 
MIHAPTPPTAPLAPALGDTVTVAVNGVNGTPSSSIVVLLAITLLSVAPALILMTTSFTKIFVVLSFTRNALGLQGVPPNQ
VLAGLALFLSLFVMAPVVSDINSVGVQPYLDGSLTFSQAVDVGSGPLREFMLGQTREQDLALLTRAADQENPASPEDVPF
ATLVPAFLLSELRSAFIMGFVIFVPFLVIDLVVSASLMSMGMMMLPPVMISLPFKILLFVLVDGWGLVVTSLVGSYTGSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-25 44
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-26 44
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-26 44
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-26 44
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-26 44
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-26 44
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-20 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-20 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-20 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-24 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-20 43
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 1e-14 43
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 1e-14 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-23 43
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 43
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 7e-15 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 8e-15 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-23 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-23 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 5e-22 42
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 2e-15 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 2e-15 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG1259 Protein 5e-46 56
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-38 55
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG2494 Protein 9e-44 53
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG2016 Protein 5e-43 52
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG0394 Protein 4e-23 46
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG0044 Protein 3e-25 45
Celf_0690 YP_004452217.1 flagellar biosynthetic protein FliP VFG0188 Protein 5e-23 43