Gene Information

Name : Celf_0674 (Celf_0674)
Accession : YP_004452201.1
Strain : Cellulomonas fimi ATCC 484
Genome accession: NC_015514
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 743867 - 745201 bp
Length : 1335 bp
Strand : +
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: type III secretion system ATPase, FliI/YscN; SMART: AAA ATPase

DNA sequence :
GTGACGACCCTCGCGCCCGCTGCTCCGGCGCCCTCGCCCGCGGCCTGGGCGCGCGCCCTCGCCGCGACCGCGCCTGAGCG
TGTCGGCACGGTCCGCGCGGTCGTCGGGCTCACGATCGAGGTCGTCGGTACCGGCGCCGCGGTCGGCGAGCTCGTGCGCG
TGGGCGACGACGTGCTGGCCGAGGTCGTCGCGACCGCCGGCGCCACCGCGCGCTGCATGCCGCTCGGTCCGACGTCCGGC
CTGCGCGCCGGGATGCCCGCGCGGCCGCTGCGCGAGCCGCTGCGCGTGCCCGTCGGACCCGGCCTGCTCGGTCGGGTCCT
CGACGGGCTGGGCCGGCCCATCGACGGCAAGGGCCCGCTGCGCGCCCGTGCGTGGGTCCCGCTCGACTCGCGTGCACCCC
ACCCGCTCGAGCGGGCGCGCGTCGACGAGCCGCTCGACCTGGGCGTCCGCGTCCTCGACACGCTCGTCACGGTCGGCCGA
GGCCAGCGGCTCGGGCTGTTCGCCGGGTCCGGCGTCGGCAAGTCGAGCCTGCTGTCGATGGTCGCGCGCGGCACCGACGC
GGAGGTGTCGGTCATCGCGCTCGTCGGTGAGCGCGGGCGCGAGGTCCGCGAGTTCCTCGAGGACGACCTGGGGCCCGAGG
GGCTCGCGCGCAGCGTCGTCGTCATCGCCACGTCCGACGAGCCGCCGCTCGTGCGCCTGCGGTCCGCGTTCCTCGCGACC
CGGATCGCGGAGGCGCTGCGCGATGAGGGCCGGCACGCGGTCCTCATGATGGACTCGCTCACCCGCGTCGCCATGGCGCA
GCGCGAGATCGGCCTGTCCGTCGGCGAGCCGCCCGCGACCCGCGGGTACCCGCCCTCGACGTTCGCGCTGCTCGCGCAGC
TGCTCGAGCGGGCCGGGACGGGCGCGACCGGGTCGGTGACCGGCCTGTACACCGTCCTCGTCGACGGCGACGACCACAAC
GAGCCGATCGCGGACGCCGCCCGGTCGATCCTCGACGGGCACGTCGTCCTCGACCGCCGGCTCGCGGTCGCCGGTCACTT
CCCGAGCGTCGACGCGCTGGGCTCGATCAGCCGCGTCGCATCCCGCGTGACGACCCCCGAGCAGCGCGACGCCGCCCGCC
GGCTGCGCGCCGTCATGGCCGCGCGCCGGCAGGCGCAGGACCTGCTCGACGTCGGCGCGTACGTCGCGGGCTCGAACCCG
CTCGTCGACGCCGCCGTCACGCACGGGCGCGCGATCGACGCGTTCCTGCGGCAGGACATCGAGGACGTCGTGCCGTCCGC
GCAGGCGTGGGCGCACCTCGCCGCGCTCGTCCAGACCTTGGGGGAGGTGCCGTGA

Protein sequence :
MTTLAPAAPAPSPAAWARALAATAPERVGTVRAVVGLTIEVVGTGAAVGELVRVGDDVLAEVVATAGATARCMPLGPTSG
LRAGMPARPLREPLRVPVGPGLLGRVLDGLGRPIDGKGPLRARAWVPLDSRAPHPLERARVDEPLDLGVRVLDTLVTVGR
GQRLGLFAGSGVGKSSLLSMVARGTDAEVSVIALVGERGREVREFLEDDLGPEGLARSVVVIATSDEPPLVRLRSAFLAT
RIAEALRDEGRHAVLMMDSLTRVAMAQREIGLSVGEPPATRGYPPSTFALLAQLLERAGTGATGSVTGLYTVLVDGDDHN
EPIADAARSILDGHVVLDRRLAVAGHFPSVDALGSISRVASRVTTPEQRDAARRLRAVMAARRQAQDLLDVGAYVAGSNP
LVDAAVTHGRAIDAFLRQDIEDVVPSAQAWAHLAALVQTLGEVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-76 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-76 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-68 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-74 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-72 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-73 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-73 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-72 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-73 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-73 49
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-58 49
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 7e-59 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-57 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-66 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 5e-66 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-65 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-65 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-66 47
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-56 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 7e-58 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-59 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG2331 Protein 3e-78 54
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG0192 Protein 2e-74 53
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG1254 Protein 1e-84 51
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG2144 Protein 1e-71 51
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG0390 Protein 1e-71 50
Celf_0674 YP_004452201.1 FliI/YscN family ATPase VFG0515 Protein 3e-66 47