Gene Information

Name : Celf_2007 (Celf_2007)
Accession : YP_004453524.1
Strain : Cellulomonas fimi ATCC 484
Genome accession: NC_015514
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2216988 - 2218661 bp
Length : 1674 bp
Strand : -
Note : KEGG: type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
GTGAAGCAGCTGGGCGAGATCCTGCTCGACGAGGGACTGGTCACCGAGGCGCAGCTGCTCATGGCGCTCGACGAGACCAT
GACGCGCGGGCAGTCGCTCGGGCGCACGCTCGTCGAGCTGGGCGTGCTCAGCGAGGGGCAGCTCGTCAAGGCGCTCGCGT
CGCAGGTCGGCATGGAGTACGTCGACCTCGACGAGTACCCCGTGGACCGCGCCGCCGTCTCGCTCGTGCCCGGCGCGCTG
TGCCGGCGGTACGTGGTGCTCCCGGTCGCGATCAAGGACGGCGCGATCGTGCTGGCCACCGCCGACCCTGGCAACGTCAT
GGCGGTGGACGACGTCCGCACGGTCGCCGGCATGCCCGTCGTCCCGGTGATCGCGACGTACGACAACCTCTCCCGCGCGA
TCGACCGGTTCTGCCGTGCCGACGACGAGATGGAGGACCTGTCGTCGGCGTTCGAGGACGAGGCTGCCGTCCCCGAGGCC
GACCTGTCGAAGATGGGCGACTTCGTCGACGACGACGCGCCGATCGTCCGCTACGTGAACCTGCTCGTGACGCAGGGCAT
CACGGACCGCGCGTCCGACATCCACATCGAGCCGTCCGAGCACGACCTGCGCGTGCGGTACCGCATCGACGGCGTGCTGC
ACGAGGTCCAGCGCTCGCCCAAGCAGATCCAGGGCGGCGTCATCAGCCGCGTGAAGATCATGAGCGACATCGACATCGCG
GAGAAGCGCAAGCCGCAGGACGGTCGCATGTCGGTCGTGCACAACGGCCGCAAGATCGACCTGCGCGTGGCGACGCTGCC
GACGGTGTGGGGCGAGAAGATCGTCATGCGCATCCTCGACAACTCCACGGCGAGCCTGGACCTGCGCGACCTGTCGTTCC
TCGAGCACAACTACGCGACGTACCAGGAGTCGTACACCAAGCCGTACGGGATGATCCTCGTCACCGGCCCGACCGGCTCC
GGCAAGTCGACCACCCTCTACGCGACCCTCAACGCGGTGTCGAAGCCCGAGATCAACGTCATCACCGTCGAGGACCCGGT
CGAGTACCGCCTCGCGGGCATCAACCAGGTCCAGGTGAACCCCAAGGCGGGCCTCACGTTCGCCGCGGCGCTGCGCTCGA
TCCTGCGCTCCGACCCCGACGTCGTGCTGCTCGGTGAGATCCGCGACCACGAGACCGCGCAGATCGCCGTCGAGGCCGCC
CTCACCGGTCACCTCGTGCTCTCGACGCTGCACACCAACGACGCGCCGTCGGCCATCACGCGTCTCACGGAGATGGGCAT
CGAGCCGTTCCTCGTGGGCTCCGCGCTCGACTGCGTGGTCGCCCAGCGACTCGCCCGGCGCCTGTGCGGCAAGTGCAAGC
AGCCGTACACGCCCACGCCGCAGGAGCTCGAGGCCGCGCGGTTCCCGTGGGTGCCGGGGGAGCCGATCCCCGAGCTGTTC
CGTCCCGCGGGGTGCGTGACGTGCTCGAAGACCGGCTACAAGGGCCGCCTCGCGCTGCACGAGGTCATGCGCGTCACGGA
GGAGATCGAGCGCCACGCCGTCGCGCACTCCTCCGCCGCGGAGATCGCCGCCACCGCGCACAAGCAGGGCATGCTCTCGC
TGCGCGACGACGGCTGGCAGAAGGTCGCCCTCGGCCTGACCTCGATCGAGGAGATCCTGCGCGTCGTCGCGTGA

Protein sequence :
MKQLGEILLDEGLVTEAQLLMALDETMTRGQSLGRTLVELGVLSEGQLVKALASQVGMEYVDLDEYPVDRAAVSLVPGAL
CRRYVVLPVAIKDGAIVLATADPGNVMAVDDVRTVAGMPVVPVIATYDNLSRAIDRFCRADDEMEDLSSAFEDEAAVPEA
DLSKMGDFVDDDAPIVRYVNLLVTQGITDRASDIHIEPSEHDLRVRYRIDGVLHEVQRSPKQIQGGVISRVKIMSDIDIA
EKRKPQDGRMSVVHNGRKIDLRVATLPTVWGEKIVMRILDNSTASLDLRDLSFLEHNYATYQESYTKPYGMILVTGPTGS
GKSTTLYATLNAVSKPEINVITVEDPVEYRLAGINQVQVNPKAGLTFAAALRSILRSDPDVVLLGEIRDHETAQIAVEAA
LTGHLVLSTLHTNDAPSAITRLTEMGIEPFLVGSALDCVVAQRLARRLCGKCKQPYTPTPQELEAARFPWVPGEPIPELF
RPAGCVTCSKTGYKGRLALHEVMRVTEEIERHAVAHSSAAEIAATAHKQGMLSLRDDGWQKVALGLTSIEEILRVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 5e-87 47
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-87 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celf_2007 YP_004453524.1 type II secretion system protein E VFG2426 Protein 3e-75 47
Celf_2007 YP_004453524.1 type II secretion system protein E VFG2048 Protein 9e-88 47
Celf_2007 YP_004453524.1 type II secretion system protein E VFG0112 Protein 9e-94 42
Celf_2007 YP_004453524.1 type II secretion system protein E VFG1880 Protein 7e-89 41