Gene Information

Name : Halhy_6633 (Halhy_6633)
Accession : YP_004451322.1
Strain :
Genome accession: NC_015511
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 110509 - 112560 bp
Length : 2052 bp
Strand : +
Note : COGs: COG2217 Cation transport ATPase; InterPro IPR006403:IPR006416:IPR001757:IPR008250:IPR005834; KEGG: mtt:Ftrac_2065 copper-translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; PRIAM: Copper

DNA sequence :
ATGGAAAACCATAACCACCACAACCATCAGGAAAACCAAGTCACCCAACCAGCCCAAATGAAAGGCCATGCTGGGCACCA
TTCGCCAAACCCTCCAATGCACCAGACTGGCCACGACCATCATGCCATGATGATTGCTGATTTTCGAAAAAGATTTTACA
TCGTCCTGATTCTGACCATTCCTATCATGCTTATATCGCCCATGATCCAGCAATTTATGGGGGTGAATTGGCAGTTTTTC
GGGTCTTCCTACCTCCTGTTGGCATTGTCCTCCGTCGTGTTTTTTTATGGCGGCTGGCCCTTTTTAACCGGCTGGATGGA
AGAGATAAAGGCAAGGAATCCCGGCATGATGTTTTTGATCGGTTTTGCCGTTACCGTTGCTTACATCTACAGTGTAGCCA
TTGTATTTGGTTTGCAGGGCATGGATTTTTTCTGGGAACTGGCCACCTTAATCCTCATCATGCTTCTAGGCCACTGGATA
GAAATGAAATCGGTGGCCGGAGCCTCCAAAGAATTAGAACTCTTGGTGCAGTTGATGCCAGCGGAAGCTCACCTGGTGAT
GTCAGATGTAATCCATGAAGTAAAAACCGATACACTCAAAGCGAACGATGTCATTTTGGTGAAACCTGGCGAAAAAGTGG
CTGCGGATGGCATTGTTTCGGAAGGAGAAAGTTACCTGAATGAATCGATGTTGACGGGGGAATCAAAACCCGTAAAAAAA
TCCACTGGAGATAAAGTCATTGCCGGTGCCATCAATGGCAACGGCGCCATTAAAGTTAACGTGTCTCATGCCGCCAAAGA
TTCGTACCTCTCGCATGTCATCAAACTGGTGGATGACGCCCAAAAATCAAAATCCAAAACCCAATTGTTGGCCGACCAGG
CCGCTAGATGGCTTACTCTCATCGCCATTGTGGCGGGGCTTGTTACTTTTTTCTACTGGTATTTAACGGGCCAATCTTTG
GTATTTGCCATGGAAAGAATGGTTACAGTCATTGTCATTTGTTGTCCACATGCGCTGGGTTTAGCCGTCCCATTGGTTGT
GGCAAAGTCAACGGCCTTGTCTGCAAAACATGGGCTGCTCATCAAAAATCGGACAGCTTTTGAGAATTCCAGAAAGATCA
GCACCATCGTATTCGATAAGACGGGGACGCTTACCGTAGGCAAATTTGAGGTGTCCAAAATCGTGGCCTTGCAAAGTGGC
CTAACTGAAAATGAAATCATCCGTTTAGCCGCTGCATTGGAACAAAAATCAGAACACCCCATTGCCACTGGAATCTTGAA
AAAGGCTAAAGACACAGCGATCCCTATTCCTGTCACGGATAATTTTAATGCCATTACAGGCAAAGGGGTGGAGGCTACCG
TAGAGGGCAAAAAGGTATTGGTGGTCAGTCCCGGCTATCTGACCGAAAACAATATTACACTTCCCGAGCGTTTCACGGCA
AACGCTACCGAAACGGTGGTTTTTGTGCTCGTCAACAATGAATTGGCTGGGTACATTGCATTATCAGATGAAATCCGCCC
TGAATCGGCAGACGCAATCAAAACCTTGGCCGATAACAAAATCAAATCCATTTTGCTCACGGGTGACAACGCCAAAGTTG
CCAAAAGTGTAAGTGAAACGTTGGGTATGGACAGTTTTATGGCAGAAGTATTGCCGCATCAAAAACTGGAAAAAATCAAA
GAATTGCAAAGCAAAGGAGAGTTTGTAGCTATGACGGGCGACGGCGTAAACGATGCTCCAGCCTTGGCTCAGGCAAACGT
GGGTATTGCGGTAGGTTCTGGTAGCGACATTGCCGCAGAAACTGCGGGAATCATTCTGGTAAACAGCAATCCAAAAGATG
TGGTGAGTCTGATCCTCTTTGGCAAAGCAACTTACCGCAAGATGATTCAAAACCTCATTTGGGCGACTGGGTACAATGTG
ATTGCCTTGCCTTTGGCTGCTGGTGTGTTGTACAATTGGGGCATATTGCTCAGCCCGGCTGCTGGTGCGGTGTTGATGAC
GGTGAGCACGGTGGTTGTGGCGATCAATGCGAGCTTGTTGAAAGTCAAGTAA

Protein sequence :
MENHNHHNHQENQVTQPAQMKGHAGHHSPNPPMHQTGHDHHAMMIADFRKRFYIVLILTIPIMLISPMIQQFMGVNWQFF
GSSYLLLALSSVVFFYGGWPFLTGWMEEIKARNPGMMFLIGFAVTVAYIYSVAIVFGLQGMDFFWELATLILIMLLGHWI
EMKSVAGASKELELLVQLMPAEAHLVMSDVIHEVKTDTLKANDVILVKPGEKVAADGIVSEGESYLNESMLTGESKPVKK
STGDKVIAGAINGNGAIKVNVSHAAKDSYLSHVIKLVDDAQKSKSKTQLLADQAARWLTLIAIVAGLVTFFYWYLTGQSL
VFAMERMVTVIVICCPHALGLAVPLVVAKSTALSAKHGLLIKNRTAFENSRKISTIVFDKTGTLTVGKFEVSKIVALQSG
LTENEIIRLAAALEQKSEHPIATGILKKAKDTAIPIPVTDNFNAITGKGVEATVEGKKVLVVSPGYLTENNITLPERFTA
NATETVVFVLVNNELAGYIALSDEIRPESADAIKTLADNKIKSILLTGDNAKVAKSVSETLGMDSFMAEVLPHQKLEKIK
ELQSKGEFVAMTGDGVNDAPALAQANVGIAVGSGSDIAAETAGIILVNSNPKDVVSLILFGKATYRKMIQNLIWATGYNV
IALPLAAGVLYNWGILLSPAAGAVLMTVSTVVVAINASLLKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-98 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halhy_6633 YP_004451322.1 heavy metal translocating P-type ATPase BAC0629 Protein 4e-168 58
Halhy_6633 YP_004451322.1 heavy metal translocating P-type ATPase BAC0079 Protein 5e-127 43
Halhy_6633 YP_004451322.1 heavy metal translocating P-type ATPase BAC0383 Protein 2e-111 42