Gene Information

Name : Halhy_0963 (Halhy_0963)
Accession : YP_004445737.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1189756 - 1189962 bp
Length : 207 bp
Strand : -
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: mtt:Ftrac_3771 transcriptional regulator, xre family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: transcriptional regulator; IMG reference gene:2504770323;

DNA sequence : 
ATGAAGAACCTGATCAAGGTCGAACGAGCAAGATCCAATATGACCCAGGCTGAATTGGCTGAAAAAGTAAAAGTTGCCCG
GCAAACCATCATTGCCATTGAGGGAGGGAAATTTGTTCCTTCTACCGTGTTGGCCTTTAAAATTGCCAAGGTGCTGAATT
GTACAATGGACCTACTTTTTGAATTGGAGGACAAGGATTGGGAGTAA

Protein sequence : 
MKNLIKVERARSNMTQAELAEKVKVARQTIIAIEGGKFVPSTVLAFKIAKVLNCTMDLLFELEDKDWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-07 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-05 41
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halhy_0963 YP_004445737.1 XRE family transcriptional regulator VFG2168 Protein 1e-05 41
Halhy_0963 YP_004445737.1 XRE family transcriptional regulator VFG2175 Protein 1e-05 41