Gene Information

Name : Halhy_6480 (Halhy_6480)
Accession : YP_004451169.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 8273951 - 8275984 bp
Length : 2034 bp
Strand : -
Note : COGs: COG2216 High-affinity K+ transport system ATPase chain B; HAMAP: Potassium-transporting ATPase, B chain; InterPro IPR006391:IPR001757:IPR008250:IPR005834; KEGG: fps:FP1691 potassium-transporting ATPase B subunit; PFAM: ATPase, P-type, ATPase-associa

DNA sequence :
ATGTCAAAGCAAAAAAATCCTTCACTCTTTGCTGCGGAGCTGATGCGACCAGCATTATTTGAAGCTTTTCGCAAACTCAA
TCCGATGGTGTTGTACCGCAATCCCGTGATGTTTACGGTAGAAATAGGTACCGCGATCATGTTGATCATGACCATCTATT
CGTTGGTCAGTGGCGACAGCAGCCAAGGCAGTTTTGCCTATAATTTGATTGTTTTTATCGTCCTTTTTCTAACGGTCTTG
TTTGCCAATTTTGCCGAAGCAATTGCCGAAGCGAGAGGAAAGGCTCAAGCGGAATCGCTGCGCAAAACCCGTGAGGATAC
ACCGGCAAAAGTTGTACGCAACGGCAATATAGAACTACTGAGTTCGTCCGTGCTCAAAAAAGGCGACATCTTCGTGTGCG
AATCAGGAGATACCATTCCCATGGACGGAGAAATTATCGAAGGTCTAGCCACCATCGACGAATCGGCCATCACGGGTGAA
TCTGCCCCGGTGATTCGGGAAGCAGGCGGTGACAAAAGCAGCGTAACGGGCGGCACCAAAGTACTCTCAGACAAAATCAA
AGTAGAAGTCACGACCCAGCCCGGCGAGTCGTTTTTGGACAAAATGATCGCCTTGGTAGAAGGTGCTTCGCGCCAAAAAA
CACCCAATGAGATTGCACTCACAGTGCTTTTGGCCGGGTTTACCCTGATTTTTATCATGGTCTGTGTCACCCTTAAACCA
TTTGGAGATTATGCGGGAACGCCAATCACCGTGGCGGCTTTTGTTTCCCTGTTTGTTTGTTTGATTCCCACAACCATTGG
TGGACTCTTATCGGCCATCGGAGTAGCGGGAATGGATCGTGCCTTGCGGGCCAACGTCATCACCAAATCAGGTAAGGCCG
TAGAAACCGCCGGAGACATTGACGTGCTGCTGCTCGACAAAACCGGGACCATCACCATCGGCAACCGCAAAGCCACGCGT
TTTTATCCTGCGCCAGGAATAAACGAGCAGGAATTCATCAAGGCTTGTGTGCTCAGTTCCTTAGCCGACGATACCCCCGA
AGGCAAAAGTATTCTGGAATTGGCGGGGGAAAATGTGGTTAAAAGTGCTTCTATCGAAGGTGCGCAGTTGATCAAATTCA
CCGCGGAAACCCGTACCAGTGGCGTCATTTTGGCCAACAAAACCGACATCCGCAAAGGTGCACAAGATGCCATTTTACGC
ATCGCCCAACAAGCGGGCAATGTATTCCCGGATGATACTACTCAAGCGGTAAAAGACATTTCCAACAATGGGGGTACTCC
CTTGGTCGTCGCGCAAAATGGCCAGGTATTGGGCGTCATCGAATTACAAGACATCATCAAACCCGGTATTCGCGAACGTT
TTGAACGCCTGCGGCGCATGGGGGTAAAAACCGTGATGGTGACGGGAGACAATCCACTCACCGCCAAATTTATTGCCGAA
AAATCTGGTGTTGACGACTTCATCGCTGAAGCCAAACCCGAAGACAAACTGGCCTACATCCGCCGGGAGCAAGCGGATGG
CAAACTGGTAGCCATGATGGGCGACGGGACCAATGATGCCCCGGCCCTGGCCCAGGCCGACGTGGGTGTGGCCATGAACA
GTGGTACCCAGGCCGCCAAAGAGGCCGGAAACATGGTGGACCTCGACAACGATCCGACCAAACTGATTGAAGTAATTGAA
ATTGGCAAACAATTGCTGATCACCCGGGGTACGCTGACCACCTTCAGCATTGCCAACGACGTGGCCAAGTACTTCGCTAT
TGTTCCAGCCTTGTTCATGGCTTCTATTCCAGCTCTGCAATTCTTAAACATCATGCACTTGAATAGCCCCGAAAGTGCCA
TCATCTCGGCGGTAATTTTCAACGCGATCATCATTCCGATGCTGATTCCGCTGGCCTTGCGAGGGGTGGCGTATCGTCCG
ATTGGTGCCGAGGCTTTGTTGCGCCGCAACTTGCTGGTGTATGGTTTGGGCGGCGTGATTTTGCCCTTTATCGGCATCAA
ATTGATTGACCTGCTGATGGCGGTTTGGTTTTAA

Protein sequence :
MSKQKNPSLFAAELMRPALFEAFRKLNPMVLYRNPVMFTVEIGTAIMLIMTIYSLVSGDSSQGSFAYNLIVFIVLFLTVL
FANFAEAIAEARGKAQAESLRKTREDTPAKVVRNGNIELLSSSVLKKGDIFVCESGDTIPMDGEIIEGLATIDESAITGE
SAPVIREAGGDKSSVTGGTKVLSDKIKVEVTTQPGESFLDKMIALVEGASRQKTPNEIALTVLLAGFTLIFIMVCVTLKP
FGDYAGTPITVAAFVSLFVCLIPTTIGGLLSAIGVAGMDRALRANVITKSGKAVETAGDIDVLLLDKTGTITIGNRKATR
FYPAPGINEQEFIKACVLSSLADDTPEGKSILELAGENVVKSASIEGAQLIKFTAETRTSGVILANKTDIRKGAQDAILR
IAQQAGNVFPDDTTQAVKDISNNGGTPLVVAQNGQVLGVIELQDIIKPGIRERFERLRRMGVKTVMVTGDNPLTAKFIAE
KSGVDDFIAEAKPEDKLAYIRREQADGKLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDNDPTKLIEVIE
IGKQLLITRGTLTTFSIANDVAKYFAIVPALFMASIPALQFLNIMHLNSPESAIISAVIFNAIIIPMLIPLALRGVAYRP
IGAEALLRRNLLVYGLGGVILPFIGIKLIDLLMAVWF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-145 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-145 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 5e-146 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-145 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-145 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-145 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-143 54
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-143 54