Gene Information

Name : Halhy_4893 (Halhy_4893)
Accession : YP_004449595.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Virulence
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 6213375 - 6215741 bp
Length : 2367 bp
Strand : -
Note : COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: chu:CHU_2941 restriction/modification methyltransferase; PFAM: DNA methylase, adenine-specific; SPTR: Restriction/modification methyltransferase; IMG

DNA sequence :
ATGAACCGCACCGTACACAATAAACTCGTTTCCTTCATCTGGTCCATTGCCGACGACTGCCTGCGCGACGTATACGTACG
TGGAAAATACCGCGATGTCATTCTGCCCATGGTGGTGCTCCGCCGCCTGGATGCCTTGCTGGAGCCTACCAAAGATGCGG
TATTGGAAGAGTTGGCCTTTCAGCGCGACGAAGCCAAATTCACCGAATGGGACGAAAATGGACTGCGGGATGCCAGCGGA
TATGTATTCTACAACACCAGCAAGTGGACCTTGCAGCTATTGAAAGATACCGCCACCAACAACCAGCAAATCCTGCAAGC
CAACTTTGAAGACTACCTGAATGGCTTCAGTCCCAATGTGAAGGAGATCATCGAGAAGTTCAAACTCAAAAGCCAGGTAC
GCCACATGGCCGCCAAGGACGTCTTGCTGGATGTACTCGAAAAATTCACTTCCCCCGCGATTAACCTAACCCCTTTTGAA
AAAACCGACCCCGATGGCCGCAAACTCCCAGCCCTGAGCAACCTGGGCATGGGCTACGTGTTTGAAGAACTCATCCGCAA
ATTCAACGAAGAAAACAACGAGGAAGCAGGCGAACACTTCACCCCTCGCGAGGTGATTGACCTGATGACCCACCTCATTT
TTGAGCCCGTGGCGCGGCAACTGCCGCCCGTCATGACGATTTACGATCCGGCCTGTGGCAGCGGGGGCATGCTCACCGAG
TCGCAAAATTTTGTCAAAGACGAAGAAGGCATCATCCAGGCCAAAGGCGATGTGTACCTCTACGGCAAGGAAATCAACGA
CGAAACCTACGCCATCTGCAAGTCGGACATGATGATTAAGGGCAACGATCCCGAGAACATCCGCGTGGGCTCCACCCTTT
CCACCGATGAGTTTGCGGGCAAAACCTTCGATTTTATGTTGTCCAACCCGCCCTATGGCAAATCCTGGGCGAGCGAGCAG
AAATACATCAAAGACGGCAAGGAGGTCATCGACTCCCGCTTCAAAATCAAACTCACGGACTATTGGGGCCAAGTCGAAGA
AGCCGACGCCACGCCCCGTTCTTCGGATGGGCAGCTCCTGTTTTTGATGGAGATGGTCAACAAAATGAAACCCCTCTCCC
AAAGCCCCCTGGGCTCGCGCATTGCCTCGGTGCACAATGGCAGCAGCTTGTTTACGGGCGATGCCGGAGGTGGCGAAAGC
AACATCCGCCGCTACCTCATCGAAAACGATTGGCTGGAAGCCATCATCCAACTGCCCAACAACCTCTTTTACAATACCGG
CATCACCACCTACATCTGGCTTTTGAGCAACCACAAGGCCGCCAGTCGCCAGGGCAAGGTCCAACTGATCGATGCGGGGC
TACTGTACCGCAAACTGCGCAAAAACCTGGGCAACAAAAACTGCGAGTTTGCCCCGGAACACATCCGCGAGATTGTGTCC
GTGTACGAGGAAATGCAGGAGATAGAACGGAGCATCAACCCCAGTACCCAAGAGGGCGAAGGCATCGCCGCCAAGGTGTT
CGACAACGCCGATTTTGGCTACTACAAGGTGAGCATCGAACGCCCCAAACGCCTGAAAGCGCAATTCACACTCGAACGCA
TCGCCGAACTGCGCTTCGACAAAAGCCTGCGCGAACCCATGGTCTGGGCTTACGAAACCTACGGCGAAGCCGTGTATACC
GACTTGGCCAAACACGAAAAGGACATCCTGGACTGGTGCGAAAAACAGGACCTGAATCTGAACGCCAAACAGAGCAAAGC
CCTCGTCAGTCCCGCCCTCTGGCACAAACAGCTCGAACTTCTGGCCCTGGCCGCCGAACTGATGCAAGCCATTGGCGGCA
GCGCATACACGGACTTCAACCGCTTCAAAAACGAGGTGGACGCCGTACTCAAAACCAAAAAGACCAAACTCTCCGCCTCC
GAAAAAAACAGCATCCTGAATGCCGTGAGCTGGTACGACGCGGAGGCCGCCAAAGTAGAAAAAGCAACCCTGAAACTAAC
GGGGGATAAACTGGCCCAGCTCCTGGCGCAACTGGGTTGTACCGAAGCCCAACTGCCCGACTACGGCTACTACCCCAGCG
ACAAAAAAGGCGAATACCTCACTTACGAAACCGAAAGCGACTTGCGGGACACCGAAAACGTACCCCTCAAAGAAAATAGC
TACCGCTACTTTCTGCGGGAAGTAAAACCCCACGTACCCGAAGCCTGGATCAACCTCGACGCCACCAAAATTGGCTACGA
GATCAGCTTCAACAAGTACTTCTACCGCCACAAGCCGCTGCGCAGCATCGAGGAAGTGAGCGCGGATATTTTGAAATTAG
AGTCAGAAAGTGATGGCTTGATTCGGGAAATTTTGTCCTTGGGGTAG

Protein sequence :
MNRTVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDALLEPTKDAVLEELAFQRDEAKFTEWDENGLRDASG
YVFYNTSKWTLQLLKDTATNNQQILQANFEDYLNGFSPNVKEIIEKFKLKSQVRHMAAKDVLLDVLEKFTSPAINLTPFE
KTDPDGRKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIDLMTHLIFEPVARQLPPVMTIYDPACGSGGMLTE
SQNFVKDEEGIIQAKGDVYLYGKEINDETYAICKSDMMIKGNDPENIRVGSTLSTDEFAGKTFDFMLSNPPYGKSWASEQ
KYIKDGKEVIDSRFKIKLTDYWGQVEEADATPRSSDGQLLFLMEMVNKMKPLSQSPLGSRIASVHNGSSLFTGDAGGGES
NIRRYLIENDWLEAIIQLPNNLFYNTGITTYIWLLSNHKAASRQGKVQLIDAGLLYRKLRKNLGNKNCEFAPEHIREIVS
VYEEMQEIERSINPSTQEGEGIAAKVFDNADFGYYKVSIERPKRLKAQFTLERIAELRFDKSLREPMVWAYETYGEAVYT
DLAKHEKDILDWCEKQDLNLNAKQSKALVSPALWHKQLELLALAAELMQAIGGSAYTDFNRFKNEVDAVLKTKKTKLSAS
EKNSILNAVSWYDAEAAKVEKATLKLTGDKLAQLLAQLGCTEAQLPDYGYYPSDKKGEYLTYETESDLRDTENVPLKENS
YRYFLREVKPHVPEAWINLDATKIGYEISFNKYFYRHKPLRSIEEVSADILKLESESDGLIREILSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 69
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 69
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halhy_4893 YP_004449595.1 N-6 DNA methylase VFG1102 Protein 0.0 69