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Name : Halhy_4015 (Halhy_4015) Accession : YP_004448736.1 Strain : Haliscomenobacter hydrossis DSM 1100 Genome accession: NC_015510 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 5076890 - 5078167 bp Length : 1278 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: coc:Coch_0734 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine-- DNA sequence : ATGTTACAAGTCAATTTTATCCGGAACAACAAGGAGCGCGTCCTGGCCGGATTGAAGAAAAGAAACGCCAAAGAGGACCT TTTCCAAACCGTTGAATCGATCCTCGAGCTCGACGAGTTGCGCAAGAGATTAAAAACGGAGTTGGACGATTTGAATGCCG AACGCAACCGCTTTTCCACCGAAATCGGTGCTTTGATGAAACAAGGCAAAAAAGAGGAAGCCGAACAATTCCGCAGCCAG GTAGTGGGTTTGAAAGAGCGCTCTGCTGTGATTGAAGAGGATTTAAAATCATCAGAAGGGCAACTTACTGAACTACTTTA CCTCGTTCCGAATATTCCGCATGAATCCGTCCCGGTGGGAATCACTCCTGAGGATAACGAAATTTTTCGGCCAGGACCCG AGCCGGAATTGGGAGAATCGGCATTGCCGCACTGGGAACTTGCCGCCAAGTACAAGGTGTTCGACCTGGAGCTGGGGGTT AAATTGACTGGGGCTGGATTTCCGGTTTATCGCGGGAAAGGAGCAAAATTGGAACGCGCACTGATCAATTTTTTCCTGGA TGAAGCAAGCGCAGCGGGATATGAAGAAATCATCCCACCACTTATGGTCAATGAAGACTCTGCACGGGGAACCGGACAAT TGCCAGACAAGGAGGCGCAAATGTACCATGTAACCCTGGATAACCTCTACCTTATCCCTACAGCTGAAGTTCCCGTTACG AATATTTACCGCGACGAAATTCTCGACGCTGCCGCCTTGCCCATCAAAATGACGGCTTATACGCCTTGTTTTCGCCGGGA AGCGGGTTCTTATGGTGCGCATGTACGTGGACTGAACCGCGTGCACCAGTTCGACAAAATCGAGATTGTACAAATTGTGC ATCCCGATAAATCGTATGATACCCTCATGGAGATGTTGGAGCACGTTGCTGGACTGCTCAATAAATTGGGTTTGCCCTTC CGTATCCTGCGCTTGTGTGGTGGAGACATGGGCTTTACTTCAGCGCTCACCTTTGATTTCGAGGTGTGGAGTGCGGCTCA AAAACGCTGGCTCGAAGTGAGTTCGGTGTCCAATTTTGAGACGTTTCAGTCTAACCGCATGAAAATGCGTTTCCGCGAAG GCAGAGACAAAGACATTCAATTGGTACACACCCTGAATGGTAGCGCCCTGGCTTTGGCACGGATCGTGGCTTCCATTCTG GAAAACAACCAAACTCCGGAGGGAATTGTTATTCCTGAAGTATTGCGTAAGTACACGGGTTTTGATTTGCTCAATTGA Protein sequence : MLQVNFIRNNKERVLAGLKKRNAKEDLFQTVESILELDELRKRLKTELDDLNAERNRFSTEIGALMKQGKKEEAEQFRSQ VVGLKERSAVIEEDLKSSEGQLTELLYLVPNIPHESVPVGITPEDNEIFRPGPEPELGESALPHWELAAKYKVFDLELGV KLTGAGFPVYRGKGAKLERALINFFLDEASAAGYEEIIPPLMVNEDSARGTGQLPDKEAQMYHVTLDNLYLIPTAEVPVT NIYRDEILDAAALPIKMTAYTPCFRREAGSYGAHVRGLNRVHQFDKIEIVQIVHPDKSYDTLMEMLEHVAGLLNKLGLPF RILRLCGGDMGFTSALTFDFEVWSAAQKRWLEVSSVSNFETFQSNRMKMRFREGRDKDIQLVHTLNGSALALARIVASIL ENNQTPEGIVIPEVLRKYTGFDLLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-74 | 44 |
