|
Name : Halhy_3320 (Halhy_3320) Accession : YP_004448052.1 Strain : Haliscomenobacter hydrossis DSM 1100 Genome accession: NC_015510 Putative virulence/resistance : Unknown Product : Xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 4187142 - 4188476 bp Length : 1335 bp Strand : + Note : COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR001998:IPR013452:IPR012307; KEGG: rbi:RB2501_04540 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase DNA sequence : ATGAGTAATTCTGTTGTATTGGGGAATCGCGAGTATTTTCCCGGGATTGGGAAAATACAGTTTGAAGGAGCTGGCTCCGA CAATCCGCTGGCCTTTAAATACTACGATGAAAATCGGGTAGTGGCGGGCAAAACCATGAAAGAGCATTTTCGCTTTGCTA CGGCTTATTGGCATACTTTCTGTGGTACAGGTGGAGATCCCTTTGGCCCGGGCACTAAAAAGTTCCCCTGGTTGGAGGCA AGTGACGCGGTACAGTCTGCCAAGGACAAAATGGATGCCGCATTTGAGTTTTTTACCAAAATTGGCACGCCCTATTTTTG TTTCCACGATGTGGATTTGGTAGACGAAGGCCCCAGCCTCGCTGAAAGCGAGCGACGGTTAAGCGCCATCGTTGACTACG CCAAAGAAAAGATTGCTGCTTCAGGGGTAAAGGTGCTGTGGGGAACGGCCAATTTGTTTTCCAATCCCCGCTACATGAAT GGCGCGGCCACCAGCCCGGATTTTAGTGTAGCAGCATATGCTGGAGCGCAGCTCAAAAATGCCATCGATGCCACCATTGC ACTCAATGGAGAAAACTACGTATTCTGGGGTGGTCGTGAAGGTTACATGTCTTTGCTGAATACTGACATGAAGCGGGAGC AAGAGCACTTGGCCCGTATGTTGAGCATGTCGCGGGATTATGCCCGCAGCCAAGGCTTCAAAGGGGTGTTTTTTATCGAA CCCAAACCCATGGAGCCCAGTAAGCACCAGTACGATTTTGACTGTGCTACGGTGGTTGGTTTCCTCAACCGTTATGGTCT GGCTGATGATTTTAAAATCAACATCGAAGTAAACCACGCCACTTTGGCGCTGCATACTTTCCAGCACGAGCTACAAGTGG CCGCCGATGCGGGCATGTTGGGCAGCATTGACGCCAACCGTGGCGATTACCAAAATGGCTGGGATACCGACCAGTTCCCC AACAACGTTATGGAATTGACGGAGTCGATGTTGGTGATCCTGCAAGCTGGTGGTTTACAAGGCGGTGGGGTGAATTTTGA TGCCAAAACCCGCCGTAACTCCACCGATCTGATCGATATCTTCTACGCCCACATTGGTGGTATGGATGTGTTTGCCCGGG CTTTGATTGCTGCCGACGCGGTTTTGAGCAAGTCGAAATTTTTGGCCATGCGCAAAGAGCGTTATGCTAGTTACGACAGC GGCAAAGGCAAGGAGTTTGAAGATGGAAAACTCAGCCTGCAAGATCTGCATGCTTTGGCCCACGCCAATCCTGAGCCGGG ATTGAGCAGCGGAAGACAGGAGTTGTACGAGAACATCCTGACTCAGTACACATAG Protein sequence : MSNSVVLGNREYFPGIGKIQFEGAGSDNPLAFKYYDENRVVAGKTMKEHFRFATAYWHTFCGTGGDPFGPGTKKFPWLEA SDAVQSAKDKMDAAFEFFTKIGTPYFCFHDVDLVDEGPSLAESERRLSAIVDYAKEKIAASGVKVLWGTANLFSNPRYMN GAATSPDFSVAAYAGAQLKNAIDATIALNGENYVFWGGREGYMSLLNTDMKREQEHLARMLSMSRDYARSQGFKGVFFIE PKPMEPSKHQYDFDCATVVGFLNRYGLADDFKINIEVNHATLALHTFQHELQVAADAGMLGSIDANRGDYQNGWDTDQFP NNVMELTESMLVILQAGGLQGGGVNFDAKTRRNSTDLIDIFYAHIGGMDVFARALIAADAVLSKSKFLAMRKERYASYDS GKGKEFEDGKLSLQDLHALAHANPEPGLSSGRQELYENILTQYT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-102 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-102 | 51 |
