Gene Information

Name : Halhy_3007 (Halhy_3007)
Accession : YP_004447743.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 3810847 - 3812292 bp
Length : 1446 bp
Strand : +
Note : COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: cpi:Cpin_2321 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; IMG reference

DNA sequence : 
ATGGAAGCTACTGCGCACCCAATCAAAAACACAAAAATCGTAGCTACGGTAGGTCCGGCATCTAACACCTACGAAGCACT
GCTCGAACTTGCCAAGGCAGGTGTGAATGTTTTTCGCCTCAACTTTTCTCATGGTACTCATGATGACCACTTGCAGGTAA
TCAACCACGTAACGTATATCAACGAGAAATACGGGATGTACCTCGGTCTTTTGGCCGATTTACAAGGTCCGAAGCTTCGG
GTTGGTGAAATCGAAAACAACGCACTTCAACTCAATCCAGGTGACATTGTCACTTTTGTCAACGAGAAGTGCGTGGGCAA
TATGGAAAGAATTTACATGAGCTACCAGGATTTCCCTAAAGATGTAAAAGTTGGGGAAACAGTTTTGGTAGACGATGGAA
AACTGGTCTTTGAAGTGGTAGAGACCAACCAAACAGACACCGTTAAGTTGAAAACCATTTACGGAGGGATTCTTTCTTCT
CGTAAAGGAGTCAACTTGCCGAATACCAAGGTGTCACTGCCTTCTTTAACGGAAAAAGACCTGGCTGATCTTGATTTTAT
CTTGACCCAACCAGTCAACTGGATTGCACTTTCCTTTGTTCGTCGTTCTGCCGACGTGAAGCAACTGCGCGAAATCCTCA
ATGAAAAGAAGCACCCTGCAAAGATCATTTCGAAGATCGAAAAGCCAGAAGCAATCGAACGCATTGACAAAATCATCAAA
GCATCTAATGCGGTGATGGTGGCGCGCGGCGACCTGGGTATCGAATTGCCGATTGAGCAAGTCCCCAATATTCAGAAGAT
GATCATCCAAAAATGCCTTCAGCGGGCTCGCCCAGTCATTGTGGCTACCCAGATGATGGAAAGTATGATGACCAATCCTT
CTCCTACCCGTGCCGAAGCTACCGACGTAGCCAATGCAGTATTGGATGGCGCTGATGCGGTGATGTTGAGTGGAGAAACT
GCTTCGGGCAAACACCCGGTGAAAGTTGTAGAGTACATGACGAAGATCATCGTCGAAGCAGAAAAATATTTTGCCATTGG
CGCTCGCCGTCCAATTCCTTCGCATAAATCGCGTACTTTCCTTTCCGACGCAGTGTGTCTGAACGCAGCAAAAACCGCCG
AAGACATCCACGCCAAGGCGATTGTGGGGATGACCAGCTCGGGATATACCGCGTTTAAAGTATCGAGTTACCGCCCTAAA
AACACCATCGAAATTTACATTTTCTCTGATCGAATGCACATGTTGGCCACCTTGAACCTGGTTTGGGGCGTGCGCTGCTA
CTACTATGATCAATTCACGACCACTGATGAAACGATCAATGATGTTACTGCAATTTTGAAAAACGACGGGGTAGTCCATC
AAGGGGATATCATTGTCAATACGGCAACCATGCCATTGCACCGTCGGCACCGCACCAACATGCTAAAAGTGACGGTGATC
GAATAA

Protein sequence : 
MEATAHPIKNTKIVATVGPASNTYEALLELAKAGVNVFRLNFSHGTHDDHLQVINHVTYINEKYGMYLGLLADLQGPKLR
VGEIENNALQLNPGDIVTFVNEKCVGNMERIYMSYQDFPKDVKVGETVLVDDGKLVFEVVETNQTDTVKLKTIYGGILSS
RKGVNLPNTKVSLPSLTEKDLADLDFILTQPVNWIALSFVRRSADVKQLREILNEKKHPAKIISKIEKPEAIERIDKIIK
ASNAVMVARGDLGIELPIEQVPNIQKMIIQKCLQRARPVIVATQMMESMMTNPSPTRAEATDVANAVLDGADAVMLSGET
ASGKHPVKVVEYMTKIIVEAEKYFAIGARRPIPSHKSRTFLSDAVCLNAAKTAEDIHAKAIVGMTSSGYTAFKVSSYRPK
NTIEIYIFSDRMHMLATLNLVWGVRCYYYDQFTTTDETINDVTAILKNDGVVHQGDIIVNTATMPLHRRHRTNMLKVTVI
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-66 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-66 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-66 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-66 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halhy_3007 YP_004447743.1 pyruvate kinase VFG0479 Protein 2e-66 44