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Name : AGROH133_10612 (AGROH133_10612) Accession : YP_004443370.1 Strain : Genome accession: NC_015508 Putative virulence/resistance : Virulence Product : C4-dicarboxylate large membrane transport protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 595161 - 596441 bp Length : 1281 bp Strand : - Note : TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP-type C4-dicarboxylate transport system, large permease component DNA sequence : ATGGCTTACACAATCCTCTTCGGTGTCTTCACCCTTCTGATGCTGATCGGTACGCCGATTGCGTTCTGCCTCGGCATTGC CTCCTTCGCCACCGTTCTTTATCTCGGCCTGCCGCCCATCGTGGTCTTCCAGCAGATGAACTCCGGCATGAACGTGTTTG CGATGATGGCGATCCCGTTCTTCATCTTCGCGGGTGACCTCATGGTCCGCGGCGGTATAGCCCATCGTCTGATCCGTTTT GCGGCCGGTCTTGTCGGTCATCTGCGCGGCGGTCTGGGGCAGGTCAACATCGTCGCTTCGACATTGTTCGGCGGCATTTC CGGCTCGGCTGTCGCCGACGCCTCGGCCGTTGGTGGCCTGATGATCCCGCAAATGGCCAAGCGCGGTTATGACCGGGATT ACGCCGTCAACGTCACTGTCAATGCCGCCATCATCGCGCTGATGATCCCGCCTTCGCACAACATGATCCTTTATTCGATC GCGGCGGGTGGCAATGTTTCGGTGGCCGATCTCTTCACCGCCGGCATCATTCCAGGCCTGCTGCTTGCTGCGGCCCTGAT GGTCACCGCCTATATCGTCGCGCGGCGCAAGGGTTACCCGTCCGAGCCGTTTCCCGGCTTTTCGAAGCTGATGTATTATC TTCTGGCGTCCTTTCCCGGCATTCTGTTGATCGGCATCATCTTCGGCGGCGTTCGTTCGGGTATCTTCACCGCGACGGAG AGCTCCTGCATTGCCGTTCTCTACGCTTTCCTTGTTGCCATGCTTGTCTATCGTGAGCTGGACTGGAGCGGTTTCGTGGA AGCGGTGATGGGGGCGGTTCGCACAACAGCGATGGTTCTGCTCGTCATCGGCACGGCTGCGTCGTTCGGCTGGTTGATGG CGTTCCTGCAGGTACAGACACTGATGATCGCGACAATCAGCGCGATTTCGGACAATCCGATTATCGTGCTTCTGGTCATC AACGTCATTCTGCTCTTGCTCGGCACTTTCATGGATATGGCACCGATGGTCATCATTTCCACGCCGGTGCTTCTGCCTGT CGTGAAGGCCTTCGGCATCGATCCCGTGCATTTCGGTGTCGTGATGATCCTGAACGCCGGTATCGGTCTCAATACGCCGC CGGTCGGAACGGTGCTCTTCGTGGGATGTGCGGTTGGCGGCATAACTATACGGGAAGCGATGCGAACGATCTGGCCGTTC TTCGGCGCCAGCATAGCCGTGCTGCTCGCCGTCACCTACATTCCGTCGCTTTCACTCTGGCTGCCGTCACTTTTCCGGTA G Protein sequence : MAYTILFGVFTLLMLIGTPIAFCLGIASFATVLYLGLPPIVVFQQMNSGMNVFAMMAIPFFIFAGDLMVRGGIAHRLIRF AAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVGGLMIPQMAKRGYDRDYAVNVTVNAAIIALMIPPSHNMILYSI AAGGNVSVADLFTAGIIPGLLLAAALMVTAYIVARRKGYPSEPFPGFSKLMYYLLASFPGILLIGIIFGGVRSGIFTATE SSCIAVLYAFLVAMLVYRELDWSGFVEAVMGAVRTTAMVLLVIGTAASFGWLMAFLQVQTLMIATISAISDNPIIVLLVI NVILLLLGTFMDMAPMVIISTPVLLPVVKAFGIDPVHFGVVMILNAGIGLNTPPVGTVLFVGCAVGGITIREAMRTIWPF FGASIAVLLAVTYIPSLSLWLPSLFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-37 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-37 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 8e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AGROH133_10612 | YP_004443370.1 | C4-dicarboxylate large membrane transport protein | VFG1110 | Protein | 5e-38 | 41 |
