Gene Information

Name : AGROH133_10306 (AGROH133_10306)
Accession : YP_004443259.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Unknown
Product : peptide ABC transporter nucleotide binding/ATPase protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.-
Position : 482143 - 483789 bp
Length : 1647 bp
Strand : -
Note : ABC transporter, nucleotide binding/ATPase protein (peptide); ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGTCGCATCCAACCACGTCAGCCGACGTGGTGCTGTCCGTTCGCAATCTCACGGTGGATCTTCCGCCGGGAATGGAGCG
CACCCACGCGGTCAAGAATATCTCTTTCGACCTCCACGCAGGTGAAATCCTGTGCATTATCGGTGAATCCGGGTCCGGCA
AATCCGTTACTGCCAGCACGATCATGGGGCTGTTGTCGCCCGTGATAAAAGTCAGCTCCGGCGAAATCCATTTCAAGGGA
ATGGACATACTTGCGGCCAGGGAAGATAAAATCCGGCCGCTGCGTGGTCAGGCGGTCTCAATCATTTTCCAGGATCCGCT
CTCCGCGCTCAATCCGCTGATGACAATCGGGGATCAGATCGCCGAAGTGCTTGAAGCGCATGGCTATGGAACGCCTGAAA
CCCGCAAGACCAAGGTTCTGGATCTACTTGAAGAAGTCGGTCTTCCCGACCCGCCTCTGATGCGGCTGCAATATCCATTC
CGTCTGTCTGGCGGACAACGCCAGCGGGTCATGATCGCCATGGCACTGGCACTCGATCCGGATGTCCTGATTGCCGATGA
GCCAACAACCGCTCTCGACGTTACCACCCAGGCGCAGATCCTTGAGCTCATCCGCAAGATACAGAAGCGCAAGAACATGA
GCGTCATGTTCATCACCCATGATTTCGGCGTCGTTGCCGAAATTGCCGATCGCGTCGTGGTGATGGAGAAGGGATATCTT
GTGGAGCAGGGAAGGGCGGACCAGGTTCTGGTCAATCCCGTCCACCCCTATACCCAGCGACTTGTCGCTGCGGTGCCACG
GATGCGGAGCACTGAGCGTTCAGTCAGCGAAGATGCCCCCGTCGTTCTCAAGGTCGAAAATCTTGAGAAGGAATATCGCA
GCTCCGGCTCGTTCTTCCGCAAGGCCCGTATTGTCAAGGCGGTCAATGGTGTCAGCTTCAAGCTTCACAAGGGCCAGACC
CTTGGTATCGTTGGCGAAAGCGGGTCGGGCAAGTCCTCGCTCGGGCGTGTCCTGCTGAAATTGCTGGACGCGGATGGCGG
TTCAATATGCTTCGATGGCCGTGACATAGCAGCGATGGACGAAACGACGTTTCGATCGTTGCGACCCTATATCCAGATGA
TTTTTCAGGATCCTTTCGCGTCGCTTAATCCCCGCCATACGATCGGCAGGATCTTGACGGTCGGCCCCGTTGCCCACGGA
ATGGCTGTGCATGAGGCGAGAATAAAGGCTCTCGGAATTCTGAAGCTCGTGGGGCTGGATGAACAGGCCTATGACCGTTA
CCCGCACGAATTCTCCGGCGGCCAACGCCAGCGCATCGGCATTGCCCGTGCACTGATGTTTGATCCGGTCGTCCTTGTGG
CCGACGAAGCCGTGTCTGCTCTCGACGTTTCCATACAGGCGCAGGTTCTGGAGCTTCTGGCGCGGGTGCAGGCTGAAATG
AAGGTGGCGATGATCTTCATCACCCATGACTTGAGAGTCGCAAGCCAGATTTGCGACGATGTGCTTGTCATGCACAAGGG
AACGGTTGTCGAACAGGGGCCGCCGGCAAAAATATTCCGGTCGCCGGCCCATCCCTATACCCGCAAACTCGTTGCTGCGA
TCCCCGGTGCGGACTGGGAACCTGCGGCAACTGCCGTCGGCACATAA

Protein sequence :
MSHPTTSADVVLSVRNLTVDLPPGMERTHAVKNISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPVIKVSSGEIHFKG
MDILAAREDKIRPLRGQAVSIIFQDPLSALNPLMTIGDQIAEVLEAHGYGTPETRKTKVLDLLEEVGLPDPPLMRLQYPF
RLSGGQRQRVMIAMALALDPDVLIADEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYL
VEQGRADQVLVNPVHPYTQRLVAAVPRMRSTERSVSEDAPVVLKVENLEKEYRSSGSFFRKARIVKAVNGVSFKLHKGQT
LGIVGESGSGKSSLGRVLLKLLDADGGSICFDGRDIAAMDETTFRSLRPYIQMIFQDPFASLNPRHTIGRILTVGPVAHG
MAVHEARIKALGILKLVGLDEQAYDRYPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQAEM
KVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPAKIFRSPAHPYTRKLVAAIPGADWEPAATAVGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-85 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-85 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 8e-85 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-85 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-96 42