Gene Information

Name : AGROH133_10099 (AGROH133_10099)
Accession : YP_004443175.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Unknown
Product : ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.27
Position : 379108 - 380931 bp
Length : 1824 bp
Strand : +
Note : ATP-binding protein; agropinic acid ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGACCGAAACCACGCCTCATCCTGTCCTCTCCATCCGCAATCTCAAGGTCTCATTCCTGCGCGACGGCACGTTGAACCC
AGTGGTTCGCGAGCTGAACCTAGACATCCGTGCCGGGGAAACACTTGCGATCGTTGGAGAAAGCGGTTCCGGCAAGAGTG
TTACGGCACTGTCCGTGATGCAGCTTCTGCCGGAAAAGACGAGCCGCATCGAAGGCTCGATCAAGCTCGACGGCGAAGAA
CTGATCGGCGCTTCCCCTGCTCGCATGCGTGAAATCCGTGGCAACCGGGTGGCGATGATCTTCCAGGAACCGATGACGAG
CCTCAATCCGGTACTGACCGTCGGGGAACAGATCGCGGAAGCCCTGATTGCCCATAACGGTATTTCGAAAAGCGTGGCAC
GGACGGAAACTTTGAAACTGATGGAGAAAGTGCGGATTCCCTCCTCTGCCAAACGTATCGACGATTACCCGCACCAGTTT
TCCGGAGGCATGCGCCAGCGCGTGATGATTGCGATAGCACTTGCCTGTCGCCCCGCCCTTCTGATTGCCGACGAACCGAC
CACGGCGCTTGACGTCACCATTCAGGCGCAGATCCTCGACCTCATCAAAACCCTGCAGGAAGAGGAAGGCACCGCTGTGC
TTTTCATCACCCATGACATGGGTGTCGTCGCTGAAATCGCCGACCGTACGCTGGTGATGTATCGTGGCGACCAGATTGAG
ACCGGCACGACACCAGAAGTCTTTGCCAGCCCGCAAAAGCCCTATACGCGCGCCCTGCTTTCCGCAGTGCCGCAACTCGG
TTCGGCCGGCGAAGATGGCCCGAGTCCTTTCCCTATTATCGACATGGAAACAGGACAGGCACTGCCACAGAAGAAGCGGC
CCGATACCATCGACGCGGCGAGCGGCAAGCTTCTCGAGGTCAGGAACCTGTCGGCGCGGTTCGAGATGCGATCCGCCTTC
ACCCGGATGGTGCACTCGCGCGTGCATGCGGTCGAAAATGTCAGCTTTTCGCTTTCGCGGGGTGAAACACTTGCGCTGGT
AGGTGAATCTGGCTGCGGAAAATCGACCACTGGCCGCTTGCTGGCCGGGCTTAACCGGCCGCATTCCGGCTCAATCCATA
TCCACGGCGCGGATGTTGGCTCCTTCACCAGATCGGACCTGTCCCGTCAAGTTCAGATGATCTTTCAGGACCCATTCGCC
AGCCTCAATCCCCGCCTGACGGTTGAAAACGCCATCGCGGAGCCTCTTTTGATCCATGGGTTGGAAACGCCCCGCAATGC
CCGAAAGCTTGCGCGTGATCTGCTTGGCGAAGTCGGTCTGGCTGGGGCGATGGCGAGCCGTTATCCGCATGAGTTTTCCG
GCGGGCAACGCCAGCGCATTTGCATCGCAAGAGCGCTGGCGCTCCAACCCGAACTCATCATTGCCGATGAGGCGGTTTCG
GCACTCGACGTTTCAGTCAAGGCTCAGGTGGTAAACTTGTTACTGGACCTTCAGGAACGACTGAAACTCGGCCTGCTGTT
CATTTCCCACGATATGGCAGTTGTCGAGCGCATGAGCCATCGCATAGCTGTAATGTATCTCGGCGAAATCGTTGAGACCG
GACCGCGCGAAGCTGTTTTCTCCAATCCGCAACATCCCTATACCCGGCGCTTGCTATCGGCCGTGCCGCTGCCAGATCCG
TCACGCAGGCATATGCGGCGCAAATTCGCTGATACAGAGTTGCGCAGCCCAATCCGGCCGAAAACCTTCACGCCGCCAAA
CCGCGAATATCGCGAAGTTACACCCGGCCACATGGTTCAGGTGTGGAATGAAGAGTGGGCCTGA

Protein sequence :
MTETTPHPVLSIRNLKVSFLRDGTLNPVVRELNLDIRAGETLAIVGESGSGKSVTALSVMQLLPEKTSRIEGSIKLDGEE
LIGASPARMREIRGNRVAMIFQEPMTSLNPVLTVGEQIAEALIAHNGISKSVARTETLKLMEKVRIPSSAKRIDDYPHQF
SGGMRQRVMIAIALACRPALLIADEPTTALDVTIQAQILDLIKTLQEEEGTAVLFITHDMGVVAEIADRTLVMYRGDQIE
TGTTPEVFASPQKPYTRALLSAVPQLGSAGEDGPSPFPIIDMETGQALPQKKRPDTIDAASGKLLEVRNLSARFEMRSAF
TRMVHSRVHAVENVSFSLSRGETLALVGESGCGKSTTGRLLAGLNRPHSGSIHIHGADVGSFTRSDLSRQVQMIFQDPFA
SLNPRLTVENAIAEPLLIHGLETPRNARKLARDLLGEVGLAGAMASRYPHEFSGGQRQRICIARALALQPELIIADEAVS
ALDVSVKAQVVNLLLDLQERLKLGLLFISHDMAVVERMSHRIAVMYLGEIVETGPREAVFSNPQHPYTRRLLSAVPLPDP
SRRHMRRKFADTELRSPIRPKTFTPPNREYREVTPGHMVQVWNEEWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-83 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-111 43