Gene Information

Name : AGROH133_09707 (AGROH133_09707)
Accession : YP_004443030.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Virulence
Product : Fe3+ siderophore ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 197318 - 198361 bp
Length : 1044 bp
Strand : -
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence : 
ATGACAATGGAAGGGCCTGCCAAAGGTCCGGCCGTGCTGCCGAGCGGCCGCTCCAACCGCATGCGGACCGCATGGCTCAG
CGCCGTGCTGGCGCTTCTGGCGCTGCTATGTGCGCTTTCCGTGGCGATTGGCACCCGCGACGTCACGTTAGTTGACATCA
CGGCAGCGCTTGCCGGTCGCGTGGAGACGGTGGCGGAAGCGGCTGTTGCGGTTCGCCTGCCGCGAACGCTGCTTGCCCTG
CTGTCCGGGGCAGCGCTCGGGCTCGCTGGCGCCATCATGCAGGGCGTTACGCGCAATCCGCTTGCCGATCCCGGTATTCT
TGGCGTCAATATGGGCGCATCACTTGCCGTCGTTATCGCCATCGTCTGGTTCGGCATTGCCTCGGCGCAGGCCTTTATCA
TCACGGCGATTGTCGGGGCAGGTGCGGCTTCAGTTTTCGTTTATGTCGTCGGCTCGCTCGGACGAGGTGGGGCAACGCCG
CTGAAACTCGCTCTGGCCGGTGCCGCCACCTCTGTCGCCTTCTCCTCACTCGTTATTGCCGTCGTGCTGCCGCGCAGCGA
TATTGCCGGTGGCATTCGTTCCTGGCAGATCGGCGGTGTCGGTGGTGCGACCTTTGACCGGATTGAGACCGTGCTGCCGT
TTCTCGCCGCCGGTTTTGCCATCAGCCTTCTTTCGGCACGCAAGCTGAATTCGCTGGCGCTTGGTGATGAGTTGGCCGCT
GGTCTTGGCGAGAATGTCGTGGTCGCGAGAGCCATCGCATCCTTTGGAGCTATCCTCCTCTGCGGTGCGGCGACTGCCAT
CTGTGGGCCAATCGGTTTCGTTGGGCTGGTCGTTCCGCATCTCTGCCGCCTGCTCGTTGGCGTCGACAATCGCTGGCTTC
TGCCATTTTCCGCGCTCGGCGGCGCCTGTCTGCTGCTTGCGGCCGATATTGTCGGGCGCATCGTGGCGCGGCCATCCGAA
CTCGATGTCGGTATCGTCACCGCCCTTGTCGGCGCACCTTTCTTCATCTGGATCGTCAGACGTCAGCGGGTACGCGAACT
GTGA

Protein sequence : 
MTMEGPAKGPAVLPSGRSNRMRTAWLSAVLALLALLCALSVAIGTRDVTLVDITAALAGRVETVAEAAVAVRLPRTLLAL
LSGAALGLAGAIMQGVTRNPLADPGILGVNMGASLAVVIAIVWFGIASAQAFIITAIVGAGAASVFVYVVGSLGRGGATP
LKLALAGAATSVAFSSLVIAVVLPRSDIAGGIRSWQIGGVGGATFDRIETVLPFLAAGFAISLLSARKLNSLALGDELAA
GLGENVVVARAIASFGAILLCGAATAICGPIGFVGLVVPHLCRLLVGVDNRWLLPFSALGGACLLLAADIVGRIVARPSE
LDVGIVTALVGAPFFIWIVRRQRVREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-40 48
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-40 48
fecD AAL08452.1 FecD Virulence SRL Protein 5e-19 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-15 41
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-15 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-15 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_09707 YP_004443030.1 Fe3+ siderophore ABC transporter permease BAC0163 Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_09707 YP_004443030.1 Fe3+ siderophore ABC transporter permease VFG0926 Protein 2e-33 48
AGROH133_09707 YP_004443030.1 Fe3+ siderophore ABC transporter permease VFG1043 Protein 3e-19 41
AGROH133_09707 YP_004443030.1 Fe3+ siderophore ABC transporter permease VFG0922 Protein 3e-19 41