Gene Information

Name : AGROH133_09695 (AGROH133_09695)
Accession : YP_004443028.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Virulence
Product : iron-III dicitrate transport system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 195472 - 196284 bp
Length : 813 bp
Strand : -
Note : putative ABC transporter, possibly in operon (iron uptake); ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACCAGCCACTCCCTTTCCGTGAACCGTCTTTCGGCCGGATACGGTGAAAGCCTCATCATCGAAGGGCTGGATCTTGT
CGTTCCGCGCGGCCAGATAACCGTCATCGTCGGCGCCAATGCCTGTGGCAAGTCCACGCTTCTTCGCAGCATGTCGAGGC
TTATCTCTCCCCGCGCCGGTCAGGTCCTGCTCGACGGAAAGTCGATCCACCGTCTTCCCTCGCGCGAACTTGCAAGACGG
ATGGGTCTTTTGCCGCAGTCACCGATTGCGCCCGAGGGCATTGTCGTTGCCGATCTGGTCAGCCGCGGCCGGCACCCGCA
TCACGGCCTTTTCGCGCGTTGGTCGCGCCAGGATGATGAGGCCGTGGCTGCAGCCCTCGTCGCCACCGATACGGTCGAAC
TTGCCGAGCGGCCGGTGGACGAACTCTCCGGCGGGCAACGGCAACGCGTATGGATCGCCATGGCGCTCGCCCAGGAGACC
GAGATATTGCTGCTCGACGAACCCACCACCTTCCTCGACATCAGCCATCAGGTGGAAGTGCTGGATCTTCTGACGGACCT
CAACCATGCCCGTCAGACCACCATCGTCATGGTGCTGCACGATCTCAATCTCGCGGCGCGCTACGCTGATCATCTGGTCG
CCATGACCGGTGGAAAGCTGCATATCTGCGGCACGCCGGAGGAGGTGCTGACGGAAGAAAACGTGCGGCACGTCTTCGGC
ATAGAAAGCCGTGTCATCGAAGACCCGACGTCGGGCAAACCAATGATGCTGCCGATCGGGCGGCACAGGACGGCGGCGCA
ACGGCCGCAATAA

Protein sequence : 
MTSHSLSVNRLSAGYGESLIIEGLDLVVPRGQITVIVGANACGKSTLLRSMSRLISPRAGQVLLDGKSIHRLPSRELARR
MGLLPQSPIAPEGIVVADLVSRGRHPHHGLFARWSRQDDEAVAAALVATDTVELAERPVDELSGGQRQRVWIAMALAQET
EILLLDEPTTFLDISHQVEVLDLLTDLNHARQTTIVMVLHDLNLAARYADHLVAMTGGKLHICGTPEEVLTEENVRHVFG
IESRVIEDPTSGKPMMLPIGRHRTAAQRPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-66 54
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-66 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-62 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-50 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-49 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-49 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_09695 YP_004443028.1 iron-III dicitrate transport system ATP-binding protein BAC0164 Protein 1e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_09695 YP_004443028.1 iron-III dicitrate transport system ATP-binding protein VFG0925 Protein 3e-64 50
AGROH133_09695 YP_004443028.1 iron-III dicitrate transport system ATP-binding protein VFG1042 Protein 1e-51 48