Gene Information

Name : AGROH133_13721 (AGROH133_13721)
Accession : YP_004444597.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Virulence
Product : iron ABC transporter nucleotide-binding protein/ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1960620 - 1961528 bp
Length : 909 bp
Strand : -
Note : ABC transporter related; ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAGAATGGGCAGCAAAAAAAGCGGCGGCGGCCTGACGGTTCAAAATGCGACAGTGACCTATCGCAACGGCCACACCGC
ATTAAGAAATGCCAGCTTTTCCATTCCACGCGGTACGATCACTGCACTTGTCGGCGTCAACGGCGCCGGCAAGTCCACGA
TTTTCAAGGCAATCATGGGTTTTGTGCCGTTGGCCGCCGGTTCTGTCTCTATTTTCGACCTACCCGTGAAGGATGCACTC
AGAAAAAACCTTGTCGCCTATGTGCCGCAAGCTGAAGAGGTGGACTGGAGTTTTCCCGTACTGGTTGAGGATGTGGTGAT
GATGGGCCGTTACGGCCACATGAACTTCTTCCGTATTCCGTCGAAACACGATCACGAGATGGTCGAGAGAGCGCTGACGC
GCGTCAATATGCTTGATTATCGCAAGCGGCAGATCGGCGAGCTTTCCGGCGGACAGAAGAAGCGGGTGTTTCTGGCCCGC
GCGCTGGCGCAGGAAGGTCAGGTTATCCTGCTGGATGAACCCTTCACCGGCGTCGACGTGACCACGGAAGAACAGATCGT
CGCGCTGTTGAAGGCACTGCGTGACGAGGGCCGCGTCATGCTGGTTTCCACCCATAATCTCGGTAGCGTACCGGAATTCT
GCGATCGCGCCGTCTTCGTCAAGGGTACCGTTCTGGCGTCGGGCAAAACAGCGGACACCTTTAACGAAGAGAACCTGCAA
AAAGCCTTTGGCGGCAGCTTGCGCCACTTCGTTCTCGGCGGGGCCGAACTGCATGATGATGCCGATCCGCGCCGGGTGAA
GGTGATTACCGACGATGAGCGGCCTTTCGTGATCTACGGAAAGAACGGCCAGAACGGACATGATCCGCAGGCTCCGAAGG
AAAAAGCCGATGATAAACAGCCTTCTTGA

Protein sequence : 
MRMGSKKSGGGLTVQNATVTYRNGHTALRNASFSIPRGTITALVGVNGAGKSTIFKAIMGFVPLAAGSVSIFDLPVKDAL
RKNLVAYVPQAEEVDWSFPVLVEDVVMMGRYGHMNFFRIPSKHDHEMVERALTRVNMLDYRKRQIGELSGGQKKRVFLAR
ALAQEGQVILLDEPFTGVDVTTEEQIVALLKALRDEGRVMLVSTHNLGSVPEFCDRAVFVKGTVLASGKTADTFNEENLQ
KAFGGSLRHFVLGGAELHDDADPRRVKVITDDERPFVIYGKNGQNGHDPQAPKEKADDKQPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-91 68
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-91 68
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-91 68
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-90 68
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-90 68
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 8e-39 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_13721 YP_004444597.1 iron ABC transporter nucleotide-binding protein/ATPase BAC0350 Protein 2e-91 68
AGROH133_13721 YP_004444597.1 iron ABC transporter nucleotide-binding protein/ATPase BAC0440 Protein 1e-88 62
AGROH133_13721 YP_004444597.1 iron ABC transporter nucleotide-binding protein/ATPase BAC0400 Protein 3e-49 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_13721 YP_004444597.1 iron ABC transporter nucleotide-binding protein/ATPase VFG0526 Protein 2e-91 68