Gene Information

Name : AGROH133_09619 (AGROH133_09619)
Accession : YP_004443003.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter nucleotide binding/ATPase protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : 3.6.3.-
Position : 166956 - 168620 bp
Length : 1665 bp
Strand : -
Note : ABC transporter, nucleotide binding/ATPase protein (oligopeptide); ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGGTTGCTGCACAGAACACCTACGCCCCTGCCATCCGCTTCGATGCTGATAATCGAAACGACCAGGCCATCATCGATGC
ACGCAATATTGCCGTGACTTTCAAGGTTGAGCACGGCACGGTGGAGGCAGTGAAGGACATTTCCTTCCAGCTTTACCGTG
GGGAGACGATCGCCATCGTTGGCGAATCCGGTTCGGGAAAATCGGTGACCGCCCGCACCATCATGGGGCTTTTGACGAAG
CGGGCCTCGGTTTCGAAAACCGCGACCGTGCGCTTCAACGGCGACGACATCCTGAAATTTTCAAGCCGCCAGCGGCGGGC
GTTGCGCGGCAACCGTATCTCGATGATCTTTCAGGAGCCGATGAGTTCGCTGAACCCGATCTATACAATCGGCAGTCAGA
TCGTCGAGGCGATCCGCGTCCACTCGAAGCTGAGCAGGAAGCAGGCCGAGGCGAGGGCGCTCGATCTTTTGCGGCAGGTG
CAGATTCCAGAACCCGAGGCGCGGCTGAAGCAATATCCGCACCAGCTTTCCGGCGGTCAACGGCAGCGTGTCATGATCGC
CATGGCGCTCTCCAACGATCCGGATGTGCTGATCGCCGACGAACCCACCACTGCACTGGATGTGACAGTTCAGGCGCAGA
TCCTCAACCTCATACGCGATCTGCAGAAGAAGCGCGGCATGGCCGTGGTGCTCATCACCCATGACCTGACGATCGTGAAG
CAGTTTTCCGATTACGTCTACGTCATGCAGCATGGCGAGATGCGTGAGCACAACACCACTGAGCGGCTGTTTGCAGCGCC
GAAGCACCCCTATACCCGAAAGCTGCTTGCTTCCGAGCCGCATGGCACCGCCAAACCACTACCGGAAAATTCCGGCGTGC
TGCTGACGGCGAATGGCGTGCGGGTGTCGTTCATGATGCGCTACGGTGGCCTGTTCAAGCCGGAATTGAAGGAGCTTGTT
GCCGTCGACGATCTTGGTCTAGCCCTCAAGCGCCATGAAACGCTGGGAATTGTCGGCGAATCCGGGTCCGGCAAAACGAC
CTTTGGCCAATCCCTGTTGCGGCTGAACGAGCCGGTGGCCGGAGAGGTGATTTTCGATGGCGAGAGGGTCGACGGCCGGT
CCCGGTCTCAAATGCGGCCTCTGCGCTCTCGCATGCAGGTCGTCTTTCAGGACCCTTTCGCCTCGCTCAATCCACGCATG
ACCATCGGCCAGATCATCGAGGAAGGGCTGGTTATCAACGGGCTTGGTAAAACAAAGGCCGAAAGGCTGGAGCGGGTGCG
CGACGCGCTGGAGGCGGCAGGCATGCCCGGCAACATCCTCTCGCGTTTCCCGCACGAGTTCTCCGGCGGCCAGCGCCAGC
GCATCGCCATTGCGCGTGCAGTCGCGCTGGAGCCAGAATTCATCCTGCTCGATGAGCCAACCTCGGCGCTCGACCTTTCC
GTTCAGGCGCAGATCATAGACCTGCTTCGCAAGCTGCAGGACGAGCGCGGCTTGAGTTACCTGTTCATCTCGCACGACCT
GAAGGTCGTTCGCGCTCTCTGCCATCGCGTCATCGTCATGCAGCGCGGCAGGATCGTGGAGGAAGGCCCCGTCGAGGAGG
TGCTGAACCGCCCGAAAACCGAATACACCCAGCGGCTCGTCCGGGCCGCCTTTGAAATCGCATAG

Protein sequence :
MVAAQNTYAPAIRFDADNRNDQAIIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTK
RASVSKTATVRFNGDDILKFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSKLSRKQAEARALDLLRQV
QIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPTTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVK
QFSDYVYVMQHGEMREHNTTERLFAAPKHPYTRKLLASEPHGTAKPLPENSGVLLTANGVRVSFMMRYGGLFKPELKELV
AVDDLGLALKRHETLGIVGESGSGKTTFGQSLLRLNEPVAGEVIFDGERVDGRSRSQMRPLRSRMQVVFQDPFASLNPRM
TIGQIIEEGLVINGLGKTKAERLERVRDALEAAGMPGNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLS
VQAQIIDLLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQRGRIVEEGPVEEVLNRPKTEYTQRLVRAAFEIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-78 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-99 41