Gene Information

Name : AGROH133_12311 (AGROH133_12311)
Accession : YP_004444035.1
Strain :
Genome accession: NC_015508
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter nucleotide-binding protein/ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1322490 - 1324130 bp
Length : 1641 bp
Strand : -
Note : ABC transporter, nucleotide binding/ATPase protein (oligopeptide); ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGGCTGACCATCTTCTCGATGTGCGCAACCTTTCCGTGGAGTTTCACACCGCAGGCGGTGTCGTGCATGCGGTGAAGGA
TGTTTCCTATCATATCGACCGTGGTGAAACGCTTGCGATCCTGGGTGAAAGCGGCTCGGGCAAATCGGTATCGTCCTCGG
CCATCATGAACCTCATCGACATGCCGCCCGGACGTATCAGCGGCGGCCAGATATTTCTTGATGGCAAAGACCTTCTGACA
ATGCCGGCTGAGGCCCGCCGCGAGATCAATGGCCGGCGCATCGCCATGATCTTTCAGGACCCGCTCAGCCATCTCAATCC
GGTCTATACCGTCGGCTGGCAGATCCGCGAGGCGATGACCACCCATGGAATGGACAGGGTGAAAGCCGAAGCGGAGGCGA
GGCGGCTTGTCGCGCGCGTTGGAATTCCTGATCCGGACGGAGCCTTGAAGAAATATCCGCATGAATTTTCTGGCGGCCAG
CGCCAGCGTGTGATGATCGCCATGGCGCTTGCGCTCCGGCCCGATCTCCTGATCGCCGACGAGCCGACCACGGCACTCGA
TGTGACGGTTCAGGCTGAAGTTCTTGCCCTGCTCAAGGAATTGCAGCGGGAAACCGGTATGGCCGTTCTCATCATCACCC
ATGATCTTGGCGTCGTTGCCGAAATCGCCGACCGCGTGGTCGTGATGGAAAAGGGCGTGCTGGTGGAGGCAGGCACGGTT
CGCGAGGTCTATCGCAACCCAAAGCATCCCTATACCCGCAAGCTCATCAGCGCCGCCCCCGGCAGGGGCGAAATGCACGA
GCCGAATGCGACCGGCGAACCGCTGCTCCGTGTGCGCGATGTGCGCAAACGTTATGGGGCTTTCGAGGCACTGAAGGGCG
TTTCCTTCGACCTTATGGCGGGGGAAACCATAGCTGTCGTCGGCGAAAGCGGTTCCGGCAAATCGACACTCGCGCGCATT
CTGCTCCGGCTCGACGAGCCGGATGCCGGCAGCGCCGAGTGGAAGGGGCGTGATCTCTTCAAGCTTTCGCCTGCCGAACT
CTTTGCCCTCAGGCGTGATTTACAGATGGTGTTTCAGGATCCAACCCAGTCGCTGAACCCCCGCATGACTGTGTTCCAGC
TGGTTTCCGAAGCCTGGGTGATCCATCCGGACATACTACCCAAAGCGAAATGGCGCGAACGGGTCGCGGAATTGCTGCAT
CAGGTCGGCCTCTCGCCGGAACATATGCGCCGTTATCCGCATCAGTTTTCCGGTGGGCAGCGGCAGAGGATCGCGATTGC
CCGCGCGCTGGCGCTGGAGCCGAAGCTCATCATCTGCGATGAAGCGGTCTCGGCGCTCGACGTGTCTGTCCAGGCGCAGG
TTGTTGCACTTCTTGACAAGCTGCGCCGTGAAATGGGCCTCTCCTTCATCTTCATCGCGCATGACCTGCCGGTGGTCCGC
GATTTTGCCGATCACGTCATGGTCATGCAGCGGGGAGAGGTTGTGGAATTCGGGACTGTCCGGCAGGTTTTCGAAGCGCC
GCGCGAGGCCTATACGCGCGCACTTCTTTCCGCCAGCCTCGATCCCGACCCCGATATGCAGTCTGTGCGTCCGATCGATG
CCGATCACACTATTGGAAATCCAAGCGGAGTTCTTTCATGA

Protein sequence :
MADHLLDVRNLSVEFHTAGGVVHAVKDVSYHIDRGETLAILGESGSGKSVSSSAIMNLIDMPPGRISGGQIFLDGKDLLT
MPAEARREINGRRIAMIFQDPLSHLNPVYTVGWQIREAMTTHGMDRVKAEAEARRLVARVGIPDPDGALKKYPHEFSGGQ
RQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLALLKELQRETGMAVLIITHDLGVVAEIADRVVVMEKGVLVEAGTV
REVYRNPKHPYTRKLISAAPGRGEMHEPNATGEPLLRVRDVRKRYGAFEALKGVSFDLMAGETIAVVGESGSGKSTLARI
LLRLDEPDAGSAEWKGRDLFKLSPAELFALRRDLQMVFQDPTQSLNPRMTVFQLVSEAWVIHPDILPKAKWRERVAELLH
QVGLSPEHMRRYPHQFSGGQRQRIAIARALALEPKLIICDEAVSALDVSVQAQVVALLDKLRREMGLSFIFIAHDLPVVR
DFADHVMVMQRGEVVEFGTVRQVFEAPREAYTRALLSASLDPDPDMQSVRPIDADHTIGNPSGVLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-92 45
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-75 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-75 44